Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:140513119-140615071

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm38728	5	140503087 to 140518270	15183	-	lncRNA gene	predicted gene, 38728
Chst12	5	140505580 to 140525238	19658	+	protein coding gene	carbohydrate sulfotransferase 12
Gm42808	5	140545486 to 140546392	906	-	lincRNA gene	predicted gene 42808
Gm32158	5	140546435 to 140546838	403	+	pseudogene	predicted gene, 32158
Grifin	5	140563119 to 140565071	1952	-	protein coding gene	galectin-related inter-fiber protein
Tssr54220	5	140565060 to 140565072	12	-	TSS region	transcription start site region 54220
Gm30603	5	140589100 to 140596595	7495	-	lncRNA gene	predicted gene, 30603
Tssr54221	5	140596548 to 140596580	32	-	TSS region	transcription start site region 54221
Tssr54222	5	140596583 to 140596603	20	-	TSS region	transcription start site region 54222
Gm43703	5	140605789 to 140606551	762	-	lincRNA gene	predicted gene 43703
Cpgi16925	5	140606283 to 140608100	1817		CpG island	CpG island 16925
Tssr49552	5	140607334 to 140607352	18	+	TSS region	transcription start site region 49552
Lfng	5	140607341 to 140615545	8204	+	protein coding gene	LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Tssr49553	5	140607703 to 140607754	51	+	TSS region	transcription start site region 49553
Cpgi16926	5	140608705 to 140608865	160		CpG island	CpG island 16926
Tssr54223	5	140609682 to 140609691	9	-	TSS region	transcription start site region 54223
Cpgi16927	5	140610589 to 140611173	584		CpG island	CpG island 16927
Tssr49554	5	140612541 to 140612577	36	+	TSS region	transcription start site region 49554