Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:137011504-137122268

41 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi16809	5	137025135 to 137025603	468		CpG island	CpG island 16809
Tssr49303	5	137025315 to 137025338	23	+	TSS region	transcription start site region 49303
Vgf	5	137026392 to 137033351	6959	+	protein coding gene	VGF nerve growth factor inducible
Cpgi16810	5	137028643 to 137029139	496		CpG island	CpG island 16810
Cpgi16811	5	137029571 to 137033131	3560		CpG island	CpG island 16811
Tssr49304	5	137030275 to 137030290	15	+	TSS region	transcription start site region 49304
Tssr49305	5	137030668 to 137030692	24	+	TSS region	transcription start site region 49305
Tssr53886	5	137032410 to 137032442	32	-	TSS region	transcription start site region 53886
Ap1s1	5	137034993 to 137046060	11067	-	protein coding gene	adaptor protein complex AP-1, sigma 1
Cpgi16812	5	137045576 to 137046382	806		CpG island	CpG island 16812
Tssr53887	5	137046026 to 137046085	59	-	TSS region	transcription start site region 53887
Tssr49306	5	137046142 to 137046178	36	+	TSS region	transcription start site region 49306
D5Mit168	5	137058375 to 137058524	149		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 168
Serpine1	5	137061504 to 137072268	10764	-	protein coding gene	serine (or cysteine) peptidase inhibitor, clade E, member 1
Tssr53888	5	137061926 to 137061930	4	-	TSS region	transcription start site region 53888
Tssr53889	5	137062049 to 137062065	16	-	TSS region	transcription start site region 53889
Tssr53890	5	137062652 to 137062662	10	-	TSS region	transcription start site region 53890
Tssr53891	5	137062985 to 137063005	20	-	TSS region	transcription start site region 53891
Tssr53892	5	137063059 to 137063082	23	-	TSS region	transcription start site region 53892
Tssr53893	5	137066591 to 137066596	5	-	TSS region	transcription start site region 53893
Tssr53894	5	137066960 to 137066971	11	-	TSS region	transcription start site region 53894
Tssr49307	5	137066968 to 137066994	26	+	TSS region	transcription start site region 49307
Tssr53895	5	137067011 to 137067028	17	-	TSS region	transcription start site region 53895
Tssr53896	5	137067882 to 137067894	12	-	TSS region	transcription start site region 53896
Tssr53897	5	137069420 to 137069444	24	-	TSS region	transcription start site region 53897
Tssr53898	5	137071128 to 137071137	9	-	TSS region	transcription start site region 53898
Tssr53899	5	137071232 to 137071249	17	-	TSS region	transcription start site region 53899
Tssr53900	5	137072261 to 137072277	16	-	TSS region	transcription start site region 53900
Cpgi16813	5	137103170 to 137103516	346		CpG island	CpG island 16813
Tssr49308	5	137103205 to 137103216	11	+	TSS region	transcription start site region 49308
Tssr53901	5	137108914 to 137108943	29	-	TSS region	transcription start site region 53901
Tssr53902	5	137109086 to 137109097	11	-	TSS region	transcription start site region 53902
Tssr53903	5	137109104 to 137109123	19	-	TSS region	transcription start site region 53903
Tssr53904	5	137109204 to 137109213	9	-	TSS region	transcription start site region 53904
Cpgi16814	5	137110127 to 137110594	467		CpG island	CpG island 16814
Trim56	5	137111286 to 137116466	5180	-	protein coding gene	tripartite motif-containing 56
Tssr53905	5	137112351 to 137112360	9	-	TSS region	transcription start site region 53905
Tssr53906	5	137116177 to 137116219	42	-	TSS region	transcription start site region 53906
Tssr53907	5	137116221 to 137116241	20	-	TSS region	transcription start site region 53907
Tssr53908	5	137116249 to 137116271	22	-	TSS region	transcription start site region 53908
Tssr53909	5	137116413 to 137116462	49	-	TSS region	transcription start site region 53909