Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:104225329-104438611

41 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ahl18	5	104239005 to 104239199	194		QTL	age related hearing loss, early onset 18
Bwem1	5	104239005 to 104239199	194		QTL	body weight day 30 males 1
Chldq12	5	104239005 to 104239199	194		QTL	cholesterol and HDL QTL 12
Cpfd3	5	104239005 to 104239199	194		QTL	cerebellum pattern fissures, declival 3
Drb2	5	104239005 to 104239199	194		QTL	dopamine receptor binding 2
Vng	5	104239005 to 126924008	22685003		heritable phenotypic marker	van gogh
D5Mit10	5	104239005 to 104239199	194		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 10
Sluc33	5	104239005 to 120573921	16334916		QTL	susceptibility to lung cancer 33
Tir5	5	104239199 to 63548099	-40691100		QTL	trypanosome infection response 5
Gm31048	5	104239313 to 104246702	7389	-	lincRNA gene	predicted gene, 31048
D5Mit400	5	104241870 to 104242043	173		DNA segment	DNA Segment, Chr 5 Massachusetts Institute of Technology 400
Gm23616	5	104297188 to 104297297	109	+	miRNA gene	predicted gene, 23616
Tssr47627	5	104299281 to 104299296	15	+	TSS region	transcription start site region 47627
Ibsp	5	104299287 to 104311472	12185	+	protein coding gene	integrin binding sialoprotein
Tssr47628	5	104302450 to 104302462	12	+	TSS region	transcription start site region 47628
Tssr47629	5	104309311 to 104309322	11	+	TSS region	transcription start site region 47629
Tssr47630	5	104309327 to 104309346	19	+	TSS region	transcription start site region 47630
Tssr47631	5	104309365 to 104309400	35	+	TSS region	transcription start site region 47631
Tssr52219	5	104310076 to 104310098	22	-	TSS region	transcription start site region 52219
Cpgi16146	5	104310082 to 104310497	415		CpG island	CpG island 16146
Tssr52220	5	104310113 to 104310136	23	-	TSS region	transcription start site region 52220
Mepe	5	104325329 to 104338611	13282	+	protein coding gene	matrix extracellular phosphoglycoprotein with ASARM motif (bone)
Tssr47632	5	104325360 to 104325368	8	+	TSS region	transcription start site region 47632
Tssr47633	5	104349134 to 104349145	11	+	TSS region	transcription start site region 47633
Diht	5	104350872 to 114963481	10612609		QTL	dopamine-induced hypothermia
D5Mit41	5	104350872 to 104351018	146		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 41
Tssr52221	5	104358732 to 104358742	10	-	TSS region	transcription start site region 52221
Tssr47634	5	104384769 to 104384791	22	+	TSS region	transcription start site region 47634
Tssr47635	5	104434298 to 104434337	39	+	TSS region	transcription start site region 47635
Tssr47636	5	104434410 to 104434422	12	+	TSS region	transcription start site region 47636
Tssr47637	5	104434524 to 104434552	28	+	TSS region	transcription start site region 47637
Tssr47638	5	104434705 to 104434739	34	+	TSS region	transcription start site region 47638
Tssr47639	5	104435112 to 104435128	16	+	TSS region	transcription start site region 47639
Spp1	5	104435118 to 104441050	5932	+	protein coding gene	secreted phosphoprotein 1
Gm42793	5	104435121 to 104436372	1251	+	unclassified gene	predicted gene 42793
D5Mit115.3	5	104435731 to 104435853	122		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 115.3
D5Mit115	5	104435822 to 104435953	131		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 115
Bbaa26	5	104435822 to 138557193	34121371		QTL	B.burgdorferi-associated arthritis 26
Tssr47640	5	104436368 to 104436387	19	+	TSS region	transcription start site region 47640
Tssr47641	5	104436535 to 104436549	14	+	TSS region	transcription start site region 47641
Tssr47642	5	104437645 to 104437656	11	+	TSS region	transcription start site region 47642