Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:97980687-98085807

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr30809	3	97992465 to 97992469	4	+	TSS region	transcription start site region 30809
Tssr34691	3	97994938 to 97994963	25	-	TSS region	transcription start site region 34691
Tssr975	3	97998416 to 97998425	9	-	TSS region	transcription start site region 975
D3Mit298.2	3	98010743 to 98010858	115		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 298.2
Cpgi13600	3	98013007 to 98014283	1276		CpG island	CpG island 13600
Tssr30810	3	98013483 to 98013502	19	+	TSS region	transcription start site region 30810
Tssr30811	3	98013503 to 98013547	44	+	TSS region	transcription start site region 30811
Notch2	3	98013538 to 98150367	136829	+	protein coding gene	notch 2
Tssr30812	3	98013550 to 98013574	24	+	TSS region	transcription start site region 30812
Tssr30813	3	98013592 to 98013609	17	+	TSS region	transcription start site region 30813
Tssr30814	3	98013620 to 98013631	11	+	TSS region	transcription start site region 30814
Gm40103	3	98022306 to 98026882	4576	-	lncRNA gene	predicted gene, 40103
Cpgi13601	3	98024433 to 98024593	160		CpG island	CpG island 13601
Gm42819	3	98030687 to 98035807	5120	+	unclassified gene	predicted gene 42819
Tssr34692	3	98032354 to 98032359	5	-	TSS region	transcription start site region 34692
Tssr30815	3	98037439 to 98037443	4	+	TSS region	transcription start site region 30815
Tssr30816	3	98045087 to 98045090	3	+	TSS region	transcription start site region 30816
Tssr34693	3	98069339 to 98069351	12	-	TSS region	transcription start site region 34693