Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:96229868-96250005

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi13543	3	96238220 to 96238474	254		CpG island	CpG island 13543
Hist2h3c2	3	96238479 to 96239127	648	-	protein coding gene	histone cluster 2, H3c2
Tssr34598	3	96238981 to 96238985	4	-	TSS region	transcription start site region 34598
Gm20632	3	96239393 to 96241819	2426	+	antisense lncRNA gene	predicted gene 20632
Hist2h2aa2	3	96239749 to 96240276	527	-	protein coding gene	histone cluster 2, H2aa2
Gm47311	3	96239868 to 96240005	137	+	miRNA gene	predicted gene, 47311
Cpgi13544	3	96240281 to 96240610	329		CpG island	CpG island 13544
Tssr34599	3	96240317 to 96240338	21	-	TSS region	transcription start site region 34599
Gm20633	3	96243550 to 96246380	2830	-	antisense lncRNA gene	predicted gene 20633
Cpgi13545	3	96245071 to 96245547	476		CpG island	CpG island 13545
Tssr34600	3	96245217 to 96245222	5	-	TSS region	transcription start site region 34600
Tssr34601	3	96245306 to 96245318	12	-	TSS region	transcription start site region 34601
Hist2h2aa1	3	96245497 to 96246052	555	+	protein coding gene	histone cluster 2, H2aa1
Tssr30705	3	96245530 to 96245546	16	+	TSS region	transcription start site region 30705
Gm20634	3	96245554 to 96248509	2955	+	unclassified non-coding RNA gene	predicted gene 20634
Gm47313	3	96245826 to 96245963	137	-	miRNA gene	predicted gene, 47313
Hist2h3c1	3	96246685 to 96247348	663	+	protein coding gene	histone cluster 2, H3c1
Tssr30706	3	96246836 to 96246850	14	+	TSS region	transcription start site region 30706
Tssr30707	3	96247830 to 96247874	44	+	TSS region	transcription start site region 30707