Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:96219868-96260005

41 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm15444	3	96209627 to 96220168	10541	-	antisense lncRNA gene	predicted gene 15444
Cpgi13541	3	96219780 to 96220496	716		CpG island	CpG island 13541
Tssr30701	3	96219858 to 96219873	15	+	TSS region	transcription start site region 30701
Tssr30702	3	96219877 to 96219900	23	+	TSS region	transcription start site region 30702
Hist2h2ab	3	96219916 to 96220353	437	+	protein coding gene	histone cluster 2, H2ab
Tssr34596	3	96219937 to 96219946	9	-	TSS region	transcription start site region 34596
Hist2h2ac	3	96220413 to 96220880	467	-	protein coding gene	histone cluster 2, H2ac
Gm44492	3	96220501 to 96220641	140	+	miRNA gene	predicted gene, 44492
Tssr34597	3	96220881 to 96220899	18	-	TSS region	transcription start site region 34597
Tssr30703	3	96221111 to 96221134	23	+	TSS region	transcription start site region 30703
Hist2h2be	3	96221119 to 96223738	2619	+	protein coding gene	histone cluster 2, H2be
Tssr30704	3	96221156 to 96221167	11	+	TSS region	transcription start site region 30704
Cpgi13542	3	96221210 to 96221607	397		CpG island	CpG island 13542
Cpgi13543	3	96238220 to 96238474	254		CpG island	CpG island 13543
Hist2h3c2	3	96238479 to 96239127	648	-	protein coding gene	histone cluster 2, H3c2
Tssr34598	3	96238981 to 96238985	4	-	TSS region	transcription start site region 34598
Gm20632	3	96239393 to 96241819	2426	+	antisense lncRNA gene	predicted gene 20632
Hist2h2aa2	3	96239749 to 96240276	527	-	protein coding gene	histone cluster 2, H2aa2
Gm47311	3	96239868 to 96240005	137	+	miRNA gene	predicted gene, 47311
Cpgi13544	3	96240281 to 96240610	329		CpG island	CpG island 13544
Tssr34599	3	96240317 to 96240338	21	-	TSS region	transcription start site region 34599
Gm20633	3	96243550 to 96246380	2830	-	antisense lncRNA gene	predicted gene 20633
Cpgi13545	3	96245071 to 96245547	476		CpG island	CpG island 13545
Tssr34600	3	96245217 to 96245222	5	-	TSS region	transcription start site region 34600
Tssr34601	3	96245306 to 96245318	12	-	TSS region	transcription start site region 34601
Hist2h2aa1	3	96245497 to 96246052	555	+	protein coding gene	histone cluster 2, H2aa1
Tssr30705	3	96245530 to 96245546	16	+	TSS region	transcription start site region 30705
Gm20634	3	96245554 to 96248509	2955	+	unclassified non-coding RNA gene	predicted gene 20634
Gm47313	3	96245826 to 96245963	137	-	miRNA gene	predicted gene, 47313
Hist2h3c1	3	96246685 to 96247348	663	+	protein coding gene	histone cluster 2, H3c1
Tssr30706	3	96246836 to 96246850	14	+	TSS region	transcription start site region 30706
Tssr30707	3	96247830 to 96247874	44	+	TSS region	transcription start site region 30707
Gm20627	3	96254619 to 96256277	1658	-	lncRNA gene	predicted gene 20627
Tssr34602	3	96256244 to 96256255	11	-	TSS region	transcription start site region 34602
Tssr34603	3	96256261 to 96256268	7	-	TSS region	transcription start site region 34603
Tssr34604	3	96256271 to 96256307	36	-	TSS region	transcription start site region 34604
Tssr34605	3	96259727 to 96259738	11	-	TSS region	transcription start site region 34605
Tssr34606	3	96259751 to 96259764	13	-	TSS region	transcription start site region 34606
Tssr34607	3	96259774 to 96259789	15	-	TSS region	transcription start site region 34607
Tssr34608	3	96259791 to 96259796	5	-	TSS region	transcription start site region 34608
Tssr34609	3	96259809 to 96259815	6	-	TSS region	transcription start site region 34609