Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:55062108-55187322

15 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
4931419H13Rik	3	55055242 to 55084002	28760	+	antisense lncRNA gene	RIKEN cDNA 4931419H13 gene
Cpgi13184	3	55111915 to 55112724	809		CpG island	CpG island 13184
Tssr29147	3	55112080 to 55112171	91	+	TSS region	transcription start site region 29147
Spg20	3	55112108 to 55137322	25214	+	protein coding gene	spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)
Tssr29148	3	55112354 to 55112376	22	+	TSS region	transcription start site region 29148
Tssr29149	3	55112377 to 55112405	28	+	TSS region	transcription start site region 29149
Tssr29150	3	55116174 to 55116195	21	+	TSS region	transcription start site region 29150
Cpgi13185	3	55117285 to 55117583	298		CpG island	CpG island 13185
Ccdc169	3	55137339 to 55172935	35596	+	protein coding gene	coiled-coil domain containing 169
Tssr29151	3	55140033 to 55140049	16	+	TSS region	transcription start site region 29151
Gm22029	3	55162314 to 55162434	120	-	miRNA gene	predicted gene, 22029
Cpgi13186	3	55181909 to 55182558	649		CpG island	CpG island 13186
Tssr29152	3	55182007 to 55182012	5	+	TSS region	transcription start site region 29152
Tssr29153	3	55182024 to 55182059	35	+	TSS region	transcription start site region 29153
Sohlh2	3	55182044 to 55209957	27913	+	protein coding gene	spermatogenesis and oogenesis specific basic helix-loop-helix 2