Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:54797068-55015887

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Smad9	3	54755582 to 54801257	45675	+	protein coding gene	SMAD family member 9
Cpgi13178	3	54797380 to 54797774	394		CpG island	CpG island 13178
Rfxap	3	54803115 to 54807791	4676	-	protein coding gene	regulatory factor X-associated protein
Cpgi13179	3	54807046 to 54808397	1351		CpG island	CpG island 13179
Tssr33283	3	54807737 to 54807746	9	-	TSS region	transcription start site region 33283
Tssr33284	3	54807752 to 54807768	16	-	TSS region	transcription start site region 33284
Tssr33285	3	54807770 to 54807804	34	-	TSS region	transcription start site region 33285
Tssr33286	3	54807816 to 54807827	11	-	TSS region	transcription start site region 33286
Gm10254	3	54810384 to 54811250	866	-	pseudogene	predicted gene 10254
Cpgi13180	3	54811189 to 54811454	265		CpG island	CpG island 13180
Tssr33287	3	54811402 to 54811404	2	-	TSS region	transcription start site region 33287
Sertm1	3	54897068 to 54915887	18819	-	protein coding gene	serine rich and transmembrane domain containing 1
Cpgi13181	3	54899375 to 54899791	416		CpG island	CpG island 13181
Cpgi13182	3	54915402 to 54916167	765		CpG island	CpG island 13182
Tssr33288	3	54915814 to 54915827	13	-	TSS region	transcription start site region 33288
Tssr33289	3	54915867 to 54915884	17	-	TSS region	transcription start site region 33289
Tssr33290	3	54915985 to 54916021	36	-	TSS region	transcription start site region 33290
Gm31358	3	54916019 to 54953257	37238	+	lncRNA gene	predicted gene, 31358