Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:174750639-174952467

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr22158 2 174760366 to 174760379 13 + TSS region transcription start site region 22158
Cpgi12868 2 174760476 to 174761148 672 CpG island CpG island 12868
Edn3 2 174760619 to 174784042 23423 + protein coding gene endothelin 3
Tssr22159 2 174760752 to 174760780 28 + TSS region transcription start site region 22159
Tssr22160 2 174760781 to 174760796 15 + TSS region transcription start site region 22160
Tssr793 2 174774820 to 174774829 9 + TSS region transcription start site region 793
Tssr28042 2 174807859 to 174807868 9 - TSS region transcription start site region 28042
Gm14617 2 174835964 to 174841174 5210 - unclassified non-coding RNA gene predicted gene 14617
Gm14618 2 174842305 to 174853357 11052 - lincRNA gene predicted gene 14618
Tssr28043 2 174849987 to 174849993 6 - TSS region transcription start site region 28043
5730415C11Rik 2 174850639 to 174852467 1828 unclassified gene RIKEN cDNA 5730415C11 gene
Cpgi12869 2 174852027 to 174852308 281 CpG island CpG island 12869
Tssr28044 2 174853218 to 174853223 5 - TSS region transcription start site region 28044
Tssr28045 2 174853244 to 174853251 7 - TSS region transcription start site region 28045
Tssr28046 2 174853281 to 174853301 20 - TSS region transcription start site region 28046
Tssr28047 2 174853303 to 174853310 7 - TSS region transcription start site region 28047
Tssr28048 2 174853355 to 174853359 4 - TSS region transcription start site region 28048
Gm14616 2 174856289 to 174866531 10242 + lincRNA gene predicted gene 14616
Gm30537 2 174880354 to 174897109 16755 + lncRNA gene predicted gene, 30537
Gm40017 2 174918374 to 174974406 56032 + lncRNA gene predicted gene, 40017
Tssr28049 2 174927743 to 174927749 6 - TSS region transcription start site region 28049
D2Jpk5 2 174927967 to 174928179 212 DNA segment DNA segment, Chr 2, Japan, Kominami 5
Gm30591 2 174935150 to 174941949 6799 - lncRNA gene predicted gene, 30591