Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:44728493-44935938

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10909 19 44734150 to 44735206 1056 CpG island CpG island 10909
Gm35610 19 44740179 to 44742943 2764 + lncRNA gene predicted gene, 35610
Cpgi10910 19 44741187 to 44742289 1102 CpG island CpG island 10910
Cpgi10911 19 44746506 to 44747056 550 CpG island CpG island 10911
Tssr156621 19 44746591 to 44746622 31 + TSS region transcription start site region 156621
Tssr156622 19 44746659 to 44746671 12 + TSS region transcription start site region 156622
Tssr156623 19 44746689 to 44746700 11 + TSS region transcription start site region 156623
Tssr156624 19 44746702 to 44746712 10 + TSS region transcription start site region 156624
Tssr156625 19 44746718 to 44746727 9 + TSS region transcription start site region 156625
Tssr159538 19 44749617 to 44749621 4 - TSS region transcription start site region 159538
Cpgi10912 19 44750342 to 44750942 600 CpG island CpG island 10912
Tssr159539 19 44750758 to 44750765 7 - TSS region transcription start site region 159539
Tssr159540 19 44750801 to 44750809 8 - TSS region transcription start site region 159540
Cpgi10913 19 44755529 to 44757711 2182 CpG island CpG island 10913
Pax2 19 44756045 to 44837871 81826 + protein coding gene paired box 2
Tssr156626 19 44756697 to 44756714 17 + TSS region transcription start site region 156626
Tssr156627 19 44756900 to 44756924 24 + TSS region transcription start site region 156627
Tssr156628 19 44756930 to 44756942 12 + TSS region transcription start site region 156628
Cpgi10914 19 44758815 to 44761072 2257 CpG island CpG island 10914
Cpgi10915 19 44761582 to 44761872 290 CpG island CpG island 10915
Gm20395 19 44773762 to 44784512 10750 - antisense lncRNA gene predicted gene 20395
Mir6405 19 44808406 to 44808529 123 + miRNA gene microRNA 6405
Tssr156629 19 44825234 to 44825238 4 + TSS region transcription start site region 156629
1700039E22Rik 19 44828493 to 44835938 7445 - antisense lncRNA gene RIKEN cDNA 1700039E22 gene
Cpgi10916 19 44835333 to 44836932 1599 CpG island CpG island 10916
Tssr156630 19 44837341 to 44837345 4 + TSS region transcription start site region 156630
Gm5246 19 44851009 to 44851976 967 + pseudogene predicted gene 5246
D19Mit27 19 44852997 to 44853171 174 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 27
Cpgi10917 19 44867683 to 44867867 184 CpG island CpG island 10917
D19Mit24 19 44872204 to 44872359 155 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 24
Cpgi10918 19 44882073 to 44883060 987 CpG island CpG island 10918
Cpgi10919 19 44893525 to 44893834 309 CpG island CpG island 10919
Cpgi10920 19 44900324 to 44900735 411 CpG island CpG island 10920
Tssr5530 19 44918432 to 44918467 35 + TSS region transcription start site region 5530
Tssr156631 19 44918501 to 44918516 15 + TSS region transcription start site region 156631
Tssr156632 19 44918539 to 44918553 14 + TSS region transcription start site region 156632
Cpgi10921 19 44930750 to 44931661 911 CpG island CpG island 10921
Slf2 19 44931119 to 44983787 52668 + protein coding gene SMC5-SMC6 complex localization factor 2
Tssr156633 19 44931154 to 44931172 18 + TSS region transcription start site region 156633
Tssr156634 19 44935431 to 44935465 34 + TSS region transcription start site region 156634