Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:83908382-84149027

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D17Mit75 17 83911825 to 83911973 148 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 75
Tssr146016 17 83917931 to 83917949 18 + TSS region transcription start site region 146016
1810073O08Rik 17 83917937 to 83921606 3669 + lncRNA gene RIKEN cDNA 1810073O08 gene
Gm23905 17 83947588 to 83947696 108 + rRNA gene predicted gene, 23905
Gm41639 17 83950991 to 83952463 1472 - lncRNA gene predicted gene, 41639
Gm35229 17 83956248 to 83957523 1275 + lncRNA gene predicted gene, 35229
Gm41638 17 83959868 to 83960930 1062 - lncRNA gene predicted gene, 41638
Gm35457 17 83963975 to 83970464 6489 + lncRNA gene predicted gene, 35457
Tssr146017 17 83976141 to 83976150 9 + TSS region transcription start site region 146017
Tssr146018 17 83980541 to 83980572 31 + TSS region transcription start site region 146018
Tssr146019 17 83980573 to 83980623 50 + TSS region transcription start site region 146019
Tssr146020 17 83985667 to 83985670 3 + TSS region transcription start site region 146020
Tssr146021 17 83986393 to 83986400 7 + TSS region transcription start site region 146021
Tssr149619 17 83990472 to 83990480 8 - TSS region transcription start site region 149619
Tssr146022 17 83998539 to 83998554 15 + TSS region transcription start site region 146022
8430430B14Rik 17 83998554 to 84013408 14854 + lncRNA gene RIKEN cDNA 8430430B14 gene
Tssr146023 17 84002297 to 84002305 8 + TSS region transcription start site region 146023
Tssr149620 17 84004028 to 84004041 13 - TSS region transcription start site region 149620
Tssr149621 17 84004347 to 84004359 12 - TSS region transcription start site region 149621
Tssr149622 17 84006864 to 84006873 9 - TSS region transcription start site region 149622
Gm37549 17 84012992 to 84017056 4064 - unclassified gene predicted gene, 37549
Gm35551 17 84020663 to 84026019 5356 - lncRNA gene predicted gene, 35551
Tssr149623 17 84025966 to 84026004 38 - TSS region transcription start site region 149623
Cpgi9562 17 84028382 to 84029027 645 CpG island CpG island 9562
Gm49967 17 84036890 to 84038262 1372 + lincRNA gene predicted gene, 49967
Tssr149624 17 84050023 to 84050042 19 - TSS region transcription start site region 149624
Cpgi9563 17 84067095 to 84067442 347 CpG island CpG island 9563
Tssr149625 17 84073752 to 84073765 13 - TSS region transcription start site region 149625
4933433H22Rik 17 84078660 to 84089875 11215 + lncRNA gene RIKEN cDNA 4933433H22 gene
Tssr149626 17 84083582 to 84083614 32 - TSS region transcription start site region 149626
Tssr149627 17 84083645 to 84083658 13 - TSS region transcription start site region 149627
Tssr146024 17 84086611 to 84086621 10 + TSS region transcription start site region 146024
Cpgi9564 17 84096321 to 84097213 892 CpG island CpG island 9564
Tssr146025 17 84100802 to 84100818 16 + TSS region transcription start site region 146025
Tssr146026 17 84100836 to 84100863 27 + TSS region transcription start site region 146026
Tssr149628 17 84103504 to 84103526 22 - TSS region transcription start site region 149628
Tssr146027 17 84103634 to 84103648 14 + TSS region transcription start site region 146027
Tssr149629 17 84106403 to 84106426 23 - TSS region transcription start site region 149629
Tssr146028 17 84108182 to 84108223 41 + TSS region transcription start site region 146028
Tssr149630 17 84115367 to 84115374 7 - TSS region transcription start site region 149630
Tssr146029 17 84116863 to 84116879 16 + TSS region transcription start site region 146029
Tssr5213 17 84117057 to 84117075 18 + TSS region transcription start site region 5213
Tssr5214 17 84117838 to 84117852 14 - TSS region transcription start site region 5214
Tssr149631 17 84119207 to 84119218 11 - TSS region transcription start site region 149631
Tssr146030 17 84119435 to 84119450 15 + TSS region transcription start site region 146030
Tssr146031 17 84119869 to 84119882 13 + TSS region transcription start site region 146031
Tssr146032 17 84119911 to 84119920 9 + TSS region transcription start site region 146032
Tssr149632 17 84121558 to 84121570 12 - TSS region transcription start site region 149632
Tssr149633 17 84121584 to 84121608 24 - TSS region transcription start site region 149633
Tssr146033 17 84125108 to 84125116 8 + TSS region transcription start site region 146033
Tssr149634 17 84125999 to 84126040 41 - TSS region transcription start site region 149634
Tssr149635 17 84126248 to 84126281 33 - TSS region transcription start site region 149635
Tssr149636 17 84126298 to 84126316 18 - TSS region transcription start site region 149636
Tssr146034 17 84126391 to 84126418 27 + TSS region transcription start site region 146034
Tssr149637 17 84127107 to 84127123 16 - TSS region transcription start site region 149637
Tssr149638 17 84128382 to 84128396 14 - TSS region transcription start site region 149638
Gm19696 17 84134033 to 84156440 22407 - lncRNA gene predicted gene, 19696
Tssr149639 17 84135389 to 84135402 13 - TSS region transcription start site region 149639
Tssr149640 17 84137197 to 84137207 10 - TSS region transcription start site region 149640
Tssr149641 17 84137230 to 84137243 13 - TSS region transcription start site region 149641
Tssr5215 17 84137884 to 84137887 3 - TSS region transcription start site region 5215
Tssr149642 17 84140956 to 84140985 29 - TSS region transcription start site region 149642
Tssr146035 17 84142891 to 84142898 7 + TSS region transcription start site region 146035
Tssr149643 17 84145883 to 84145894 11 - TSS region transcription start site region 149643
Tssr149644 17 84145916 to 84145938 22 - TSS region transcription start site region 149644
Tssr146036 17 84146100 to 84146116 16 + TSS region transcription start site region 146036