Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:28434898-28536718

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fkbp5 17 28398753 to 28486149 87396 - protein coding gene FK506 binding protein 5
Tssr147115 17 28438032 to 28438047 15 - TSS region transcription start site region 147115
Tssr147116 17 28438050 to 28438061 11 - TSS region transcription start site region 147116
Tssr147117 17 28441374 to 28441387 13 - TSS region transcription start site region 147117
Tssr147118 17 28441689 to 28441706 17 - TSS region transcription start site region 147118
Tssr147119 17 28441718 to 28441732 14 - TSS region transcription start site region 147119
Gm22146 17 28446599 to 28455602 9003 + antisense lncRNA gene predicted gene, 22146
Gm49799 17 28446861 to 28447148 287 + unclassified non-coding RNA gene predicted gene, 49799
Tssr147120 17 28452029 to 28452034 5 - TSS region transcription start site region 147120
Tssr147121 17 28455648 to 28455651 3 - TSS region transcription start site region 147121
Gm49839 17 28457484 to 28461095 3611 - unclassified gene predicted gene, 49839
Tssr147122 17 28467272 to 28467276 4 - TSS region transcription start site region 147122
Tssr147123 17 28484869 to 28484872 3 - TSS region transcription start site region 147123
Cpgi8887 17 28484898 to 28486718 1820 CpG island CpG island 8887
Tssr147124 17 28486082 to 28486099 17 - TSS region transcription start site region 147124
Tssr147125 17 28486108 to 28486149 41 - TSS region transcription start site region 147125
Tssr143433 17 28505740 to 28505752 12 + TSS region transcription start site region 143433
Tssr147126 17 28507398 to 28507449 51 - TSS region transcription start site region 147126
Tssr147127 17 28507474 to 28507489 15 - TSS region transcription start site region 147127
Tssr147128 17 28507514 to 28507529 15 - TSS region transcription start site region 147128
Tssr147129 17 28507536 to 28507557 21 - TSS region transcription start site region 147129
Tssr147130 17 28510041 to 28510050 9 - TSS region transcription start site region 147130
Tssr147131 17 28512029 to 28512033 4 - TSS region transcription start site region 147131
Tssr5055 17 28513971 to 28514009 38 + TSS region transcription start site region 5055
Tssr147132 17 28515533 to 28515538 5 - TSS region transcription start site region 147132
Tssr147133 17 28517491 to 28517504 13 - TSS region transcription start site region 147133
Tssr147134 17 28517509 to 28517558 49 - TSS region transcription start site region 147134
Cpgi8888 17 28517729 to 28518553 824 CpG island CpG island 8888
Gm49861 17 28520008 to 28520250 242 + pseudogene predicted gene, 49861
Gm20109 17 28522381 to 28523148 767 - lincRNA gene predicted gene, 20109
Cpgi8889 17 28522585 to 28523845 1260 CpG island CpG island 8889
E230001N04Rik 17 28522720 to 28525398 2678 + lincRNA gene RIKEN cDNA E230001N04 gene
Tssr143434 17 28522722 to 28522761 39 + TSS region transcription start site region 143434
Tssr143435 17 28523275 to 28523314 39 + TSS region transcription start site region 143435
Tssr143436 17 28523318 to 28523327 9 + TSS region transcription start site region 143436
Gm25195 17 28526332 to 28526457 125 + miRNA gene predicted gene, 25195
Gm41506 17 28528743 to 28530734 1991 - bidirectional promoter lncRNA gene predicted gene, 41506
Tssr143437 17 28530828 to 28530833 5 + TSS region transcription start site region 143437
Tssr143438 17 28530834 to 28530879 45 + TSS region transcription start site region 143438
Armc12 17 28530861 to 28538975 8114 + protein coding gene armadillo repeat containing 12
Tssr143439 17 28532171 to 28532201 30 + TSS region transcription start site region 143439
Cpgi8890 17 28533479 to 28533671 192 CpG island CpG island 8890