Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:5523887-5547187

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Xbp1	11	5520659 to 5525893	5234	+	protein coding gene	X-box binding protein 1
Tssr100181	11	5524789 to 5524804	15	+	TSS region	transcription start site region 100181
Tssr100182	11	5525191 to 5525204	13	+	TSS region	transcription start site region 100182
Tssr100183	11	5525255 to 5525275	20	+	TSS region	transcription start site region 100183
Tssr100184	11	5525474 to 5525486	12	+	TSS region	transcription start site region 100184
Ccdc117	11	5528887 to 5542187	13300	-	protein coding gene	coiled-coil domain containing 117
Cpgi2536	11	5541475 to 5542378	903		CpG island	CpG island 2536
Tssr106628	11	5541768 to 5541774	6	-	TSS region	transcription start site region 106628
Tssr100185	11	5541872 to 5541893	21	+	TSS region	transcription start site region 100185
Tssr100186	11	5541896 to 5541929	33	+	TSS region	transcription start site region 100186
Tssr100187	11	5541932 to 5541942	10	+	TSS region	transcription start site region 100187
Tssr106629	11	5542139 to 5542170	31	-	TSS region	transcription start site region 106629
Tssr106630	11	5542177 to 5542219	42	-	TSS region	transcription start site region 106630
Tssr106631	11	5542226 to 5542243	17	-	TSS region	transcription start site region 106631
Tssr106632	11	5542244 to 5542267	23	-	TSS region	transcription start site region 106632
Tssr100188	11	5542441 to 5542446	5	+	TSS region	transcription start site region 100188