Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:51663687-51891925

36 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
0610009B22Rik	11	51685386 to 51688874	3488	-	protein coding gene	RIKEN cDNA 0610009B22 gene
Cpgi2840	11	51688469 to 51689299	830		CpG island	CpG island 2840
Tssr107822	11	51688503 to 51688514	11	-	TSS region	transcription start site region 107822
Tssr107823	11	51688614 to 51688669	55	-	TSS region	transcription start site region 107823
Sec24a	11	51692263 to 51757280	65017	-	protein coding gene	Sec24 related gene family, member A (S. cerevisiae)
Tssr107824	11	51693098 to 51693142	44	-	TSS region	transcription start site region 107824
Tssr107825	11	51693462 to 51693466	4	-	TSS region	transcription start site region 107825
Gm25291	11	51737779 to 51737922	143	-	snoRNA gene	predicted gene, 25291
Tssr3489	11	51755656 to 51755666	10	-	TSS region	transcription start site region 3489
Cpgi2841	11	51755709 to 51757099	1390		CpG island	CpG island 2841
Tssr101289	11	51755941 to 51755944	3	+	TSS region	transcription start site region 101289
Tssr107826	11	51756378 to 51756493	115	-	TSS region	transcription start site region 107826
Cpgi2842	11	51763560 to 51764084	524		CpG island	CpG island 2842
Tssr107827	11	51763596 to 51763637	41	-	TSS region	transcription start site region 107827
Tssr101290	11	51763654 to 51763669	15	+	TSS region	transcription start site region 101290
Tssr101291	11	51763682 to 51763749	67	+	TSS region	transcription start site region 101291
Sar1b	11	51763687 to 51791925	28238	+	protein coding gene	secretion associated Ras related GTPase 1B
Jade2	11	51813455 to 51857653	44198	-	protein coding gene	jade family PHD finger 2
Tssr107828	11	51833520 to 51833547	27	-	TSS region	transcription start site region 107828
Tssr107829	11	51834078 to 51834084	6	-	TSS region	transcription start site region 107829
Gm30110	11	51855510 to 51856597	1087	+	lncRNA gene	predicted gene, 30110
Cpgi2843	11	51855559 to 51858689	3130		CpG island	CpG island 2843
Tssr107830	11	51857089 to 51857110	21	-	TSS region	transcription start site region 107830
Tssr107831	11	51857599 to 51857610	11	-	TSS region	transcription start site region 107831
Tssr107832	11	51857624 to 51857686	62	-	TSS region	transcription start site region 107832
Tssr107833	11	51857988 to 51858043	55	-	TSS region	transcription start site region 107833
Cpgi2844	11	51858740 to 51859146	406		CpG island	CpG island 2844
Gm39820	11	51862017 to 51869812	7795	-	lncRNA gene	predicted gene, 39820
Tssr107834	11	51874997 to 51875000	3	-	TSS region	transcription start site region 107834
Tssr101292	11	51876085 to 51876110	25	+	TSS region	transcription start site region 101292
Tssr101293	11	51884007 to 51884014	7	+	TSS region	transcription start site region 101293
Gm39821	11	51884029 to 51889041	5012	+	lncRNA gene	predicted gene, 39821
Tssr101294	11	51884073 to 51884121	48	+	TSS region	transcription start site region 101294
Tssr101295	11	51884139 to 51884147	8	+	TSS region	transcription start site region 101295
Tssr101296	11	51884265 to 51884284	19	+	TSS region	transcription start site region 101296
Gm46281	11	51889060 to 51890280	1220	+	lncRNA gene	predicted gene, 46281