Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:3474375-3524821

29 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
8430429K09Rik	11	3452437 to 3479831	27394	+	lncRNA gene	RIKEN cDNA 8430429K09 gene
Gm24439	11	3474285 to 3474401	116	-	snoRNA gene	predicted gene, 24439
D630033L23Rik	11	3476358 to 3477243	885		unclassified gene	RIKEN cDNA D630033L23 gene
Tssr100053	11	3488208 to 3488232	24	+	TSS region	transcription start site region 100053
Tssr100054	11	3488275 to 3488287	12	+	TSS region	transcription start site region 100054
Pla2g3	11	3488284 to 3499350	11066	+	protein coding gene	phospholipase A2, group III
Tssr100055	11	3488292 to 3488304	12	+	TSS region	transcription start site region 100055
Inpp5j	11	3494375 to 3504821	10446	-	protein coding gene	inositol polyphosphate 5-phosphatase J
Tssr106476	11	3497423 to 3497435	12	-	TSS region	transcription start site region 106476
Cpgi2481	11	3502157 to 3502529	372		CpG island	CpG island 2481
Tssr106477	11	3502636 to 3502667	31	-	TSS region	transcription start site region 106477
Tssr106478	11	3503001 to 3503017	16	-	TSS region	transcription start site region 106478
Tssr106479	11	3504747 to 3504762	15	-	TSS region	transcription start site region 106479
Tssr106480	11	3504766 to 3504833	67	-	TSS region	transcription start site region 106480
Tssr106481	11	3504993 to 3505003	10	-	TSS region	transcription start site region 106481
Tssr106482	11	3505462 to 3505471	9	-	TSS region	transcription start site region 106482
Tssr106483	11	3509224 to 3509227	3	-	TSS region	transcription start site region 106483
Cpgi2482	11	3514600 to 3515125	525		CpG island	CpG island 2482
Selenom	11	3514702 to 3517351	2649	+	protein coding gene	selenoprotein M
Tssr100056	11	3514861 to 3514894	33	+	TSS region	transcription start site region 100056
Tssr100057	11	3514897 to 3514928	31	+	TSS region	transcription start site region 100057
Tssr100058	11	3514930 to 3514952	22	+	TSS region	transcription start site region 100058
Tssr3409	11	3516055 to 3516073	18	+	TSS region	transcription start site region 3409
Tssr100059	11	3516829 to 3516876	47	+	TSS region	transcription start site region 100059
Cpgi2483	11	3516967 to 3517181	214		CpG island	CpG island 2483
Cpgi2484	11	3517473 to 3517932	459		CpG island	CpG island 2484
Smtn	11	3517522 to 3539654	22132	-	protein coding gene	smoothelin
Cpgi2485	11	3521029 to 3521226	197		CpG island	CpG island 2485
Cpgi2486	11	3521641 to 3521807	166		CpG island	CpG island 2486