Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:82885498-83295900

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Txnrd1 10 82833951 to 82897712 63761 + protein coding gene thioredoxin reductase 1
Tssr94853 10 82887655 to 82887668 13 + TSS region transcription start site region 94853
Tssr94854 10 82887697 to 82887713 16 + TSS region transcription start site region 94854
Tssr94855 10 82887722 to 82887731 9 + TSS region transcription start site region 94855
9130221J17Rik 10 82891381 to 82895015 3634 unclassified gene RIKEN cDNA 9130221J17 gene
Tssr94856 10 82896868 to 82896880 12 + TSS region transcription start site region 94856
Tssr94857 10 82896913 to 82896934 21 + TSS region transcription start site region 94857
Tssr94858 10 82897062 to 82897073 11 + TSS region transcription start site region 94858
Tssr94859 10 82897234 to 82897265 31 + TSS region transcription start site region 94859
Tssr94860 10 82897434 to 82897446 12 + TSS region transcription start site region 94860
Tssr94861 10 82897472 to 82897514 42 + TSS region transcription start site region 94861
Gm33781 10 82927003 to 82934640 7637 - lncRNA gene predicted gene, 33781
Cpgi2028 10 82954260 to 82954748 488 CpG island CpG island 2028
Gm4799 10 82954344 to 82955000 656 + pseudogene predicted gene 4799
Tssr94862 10 82954556 to 82954567 11 + TSS region transcription start site region 94862
Tssr98686 10 82955197 to 82955200 3 - TSS region transcription start site region 98686
Tssr98687 10 82955348 to 82955373 25 - TSS region transcription start site region 98687
Tssr94863 10 82958211 to 82958213 2 + TSS region transcription start site region 94863
Tssr98688 10 82958390 to 82958440 50 - TSS region transcription start site region 98688
Tssr98689 10 82961467 to 82961468 1 - TSS region transcription start site region 98689
Cpgi2029 10 82984773 to 82986481 1708 CpG island CpG island 2029
Tssr94864 10 82985345 to 82985381 36 + TSS region transcription start site region 94864
Tssr94865 10 82985384 to 82985436 52 + TSS region transcription start site region 94865
Tssr94866 10 82985443 to 82985454 11 + TSS region transcription start site region 94866
Tssr94867 10 82985473 to 82985504 31 + TSS region transcription start site region 94867
Chst11 10 82985498 to 83195900 210402 + protein coding gene carbohydrate sulfotransferase 11
Tssr3293 10 82986375 to 82986387 12 - TSS region transcription start site region 3293
Tssr94868 10 82987210 to 82987211 1 + TSS region transcription start site region 94868
Pwgrq19 10 82992866 to 92333194 9340328 QTL post-weaning growth rate QTL 19
Gm10773 10 83027761 to 83031695 3934 - protein coding gene predicted gene 10773
Tssr94869 10 83094627 to 83094628 1 + TSS region transcription start site region 94869
Tssr94870 10 83098087 to 83098090 3 + TSS region transcription start site region 94870
D10Mit227 10 83107360 to 83107473 113 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 227
1700025N21Rik 10 83139150 to 83142038 2888 - antisense lncRNA gene RIKEN cDNA 1700025N21 gene
Tssr98690 10 83153973 to 83153984 11 - TSS region transcription start site region 98690
Gm23122 10 83158025 to 83158127 102 - snRNA gene predicted gene, 23122
D10Mit160 10 83183489 to 83183618 129 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 160
Cpgi2030 10 83191195 to 83191731 536 CpG island CpG island 2030
Slc41a2 10 83230848 to 83337882 107034 - protein coding gene solute carrier family 41, member 2
Tssr98691 10 83239344 to 83239381 37 - TSS region transcription start site region 98691