Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:120617571-120819030

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr99581 10 120624287 to 120624320 33 - TSS region transcription start site region 99581
Tssr96002 10 120625650 to 120625672 22 + TSS region transcription start site region 96002
Tssr3377 10 120625704 to 120625709 5 - TSS region transcription start site region 3377
Tssr99582 10 120628153 to 120628169 16 - TSS region transcription start site region 99582
4930471E19Rik 10 120632672 to 120699203 66531 - lincRNA gene RIKEN cDNA 4930471E19 gene
Tssr96003 10 120634863 to 120634872 9 + TSS region transcription start site region 96003
Tssr99583 10 120636102 to 120636107 5 - TSS region transcription start site region 99583
Tssr3378 10 120653362 to 120653374 12 - TSS region transcription start site region 3378
Gm38289 10 120663252 to 120667017 3765 - unclassified gene predicted gene, 38289
Tssr99584 10 120686244 to 120686253 9 - TSS region transcription start site region 99584
Gm35062 10 120688412 to 120695179 6767 + lncRNA gene predicted gene, 35062
Cpgi2270 10 120688415 to 120688797 382 CpG island CpG island 2270
Gm35130 10 120717571 to 120719030 1459 - lncRNA gene predicted gene, 35130
Tssr96004 10 120729688 to 120729695 7 + TSS region transcription start site region 96004
Gm37505 10 120731815 to 120732855 1040 + unclassified gene predicted gene, 37505
Gm10743 10 120745976 to 120748333 2357 - unclassified gene predicted gene 10743
Gm35182 10 120751662 to 120752335 673 - lncRNA gene predicted gene, 35182
Gm48202 10 120760821 to 120766028 5207 - lincRNA gene predicted gene, 48202
4921513I03Rik 10 120765732 to 120778886 13154 + lincRNA gene RIKEN cDNA 4921513I03 gene
Tssr96005 10 120775980 to 120775982 2 + TSS region transcription start site region 96005
Msrb3 10 120781096 to 120899101 118005 - protein coding gene methionine sulfoxide reductase B3
Tssr99585 10 120782015 to 120782043 28 - TSS region transcription start site region 99585
Tssr99586 10 120782047 to 120782065 18 - TSS region transcription start site region 99586
Tssr99587 10 120782332 to 120782344 12 - TSS region transcription start site region 99587
Tssr99588 10 120782700 to 120782703 3 - TSS region transcription start site region 99588
Tssr99589 10 120783310 to 120783316 6 - TSS region transcription start site region 99589
Tssr96006 10 120787256 to 120787264 8 + TSS region transcription start site region 96006
Tssr96007 10 120787285 to 120787297 12 + TSS region transcription start site region 96007
Gm15961 10 120800677 to 120801794 1117 + antisense lncRNA gene predicted gene 15961
Tssr99590 10 120805592 to 120805613 21 - TSS region transcription start site region 99590
Cpgi2271 10 120811993 to 120812261 268 CpG island CpG island 2271