Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:90103980-90315724

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Iqca	1	90042132 to 90153401	111269	-	protein coding gene	IQ motif containing with AAA domain
Tssr12911	1	90153396 to 90153406	10	-	TSS region	transcription start site region 12911
Tssr12912	1	90153426 to 90153442	16	-	TSS region	transcription start site region 12912
4930434B07Rik	1	90153628 to 90159462	5834	+	lincRNA gene	RIKEN cDNA 4930434B07 gene
Cpgi562	1	90203858 to 90204132	274		CpG island	CpG island 562
Ackr3	1	90203980 to 90215724	11744	+	protein coding gene	atypical chemokine receptor 3
Tssr8015	1	90203995 to 90204012	17	+	TSS region	transcription start site region 8015
Cpgi563	1	90222239 to 90222391	152		CpG island	CpG island 563
Gm38277	1	90227160 to 90228526	1366	-	unclassified gene	predicted gene, 38277
Gm34930	1	90247265 to 90261655	14390	+	lncRNA gene	predicted gene, 34930
Tssr8016	1	90252721 to 90252726	5	+	TSS region	transcription start site region 8016
Gm28721	1	90255276 to 90260120	4844	-	lincRNA gene	predicted gene 28721
2700003A03Rik	1	90270711 to 90290770	20059	+	lncRNA gene	RIKEN cDNA 2700003A03 gene
Gm28723	1	90280458 to 90283912	3454	+	lincRNA gene	predicted gene 28723