Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:74770813-74893532

52 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi391	1	74771110 to 74772636	1526		CpG island	CpG island 391
Tssr7458	1	74771725 to 74771751	26	+	TSS region	transcription start site region 7458
Tssr7459	1	74771762 to 74771791	29	+	TSS region	transcription start site region 7459
Tssr7460	1	74771886 to 74771911	25	+	TSS region	transcription start site region 7460
Wnt6	1	74771892 to 74785322	13430	+	protein coding gene	wingless-type MMTV integration site family, member 6
Tssr7461	1	74771914 to 74771932	18	+	TSS region	transcription start site region 7461
Tssr7462	1	74772012 to 74772019	7	+	TSS region	transcription start site region 7462
Gm29539	1	74774943 to 74777405	2462	-	antisense lncRNA gene	predicted gene 29539
Tssr7463	1	74779414 to 74779436	22	+	TSS region	transcription start site region 7463
Cpgi392	1	74782182 to 74783142	960		CpG island	CpG island 392
Cpgi393	1	74783725 to 74784822	1097		CpG island	CpG island 393
Gm32099	1	74787169 to 74795333	8164	-	lncRNA gene	predicted gene, 32099
Cpgi394	1	74791242 to 74792366	1124		CpG island	CpG island 394
Tssr7464	1	74791750 to 74791768	18	+	TSS region	transcription start site region 7464
Tssr7465	1	74791806 to 74791818	12	+	TSS region	transcription start site region 7465
Wnt10a	1	74792019 to 74804176	12157	+	protein coding gene	wingless-type MMTV integration site family, member 10A
Tssr7466	1	74792023 to 74792076	53	+	TSS region	transcription start site region 7466
Tssr7467	1	74792137 to 74792157	20	+	TSS region	transcription start site region 7467
Cpgi395	1	74794172 to 74795228	1056		CpG island	CpG island 395
Tssr7468	1	74794637 to 74794650	13	+	TSS region	transcription start site region 7468
Tssr7469	1	74794713 to 74794716	3	+	TSS region	transcription start site region 7469
Cpgi396	1	74800426 to 74801006	580		CpG island	CpG island 396
Cpgi397	1	74802993 to 74803936	943		CpG island	CpG island 397
Cpgi398	1	74807017 to 74807293	276		CpG island	CpG island 398
n-TGgcc3	1	74816747 to 74816817	70	-	tRNA gene	nuclear encoded tRNA glycine 3 (anticodon GCC)
Cpgi399	1	74816832 to 74817315	483		CpG island	CpG island 399
Tssr7470	1	74817000 to 74817039	39	+	TSS region	transcription start site region 7470
Tssr7471	1	74817041 to 74817064	23	+	TSS region	transcription start site region 7471
Tssr7472	1	74817065 to 74817076	11	+	TSS region	transcription start site region 7472
Gm32275	1	74820813 to 74843532	22719	-	lncRNA gene	predicted gene, 32275
Gm16582	1	74850895 to 74879953	29058	+	lncRNA gene	predicted gene 16582
Tssr12326	1	74851106 to 74851114	8	-	TSS region	transcription start site region 12326
Cpgi400	1	74854460 to 74856610	2150		CpG island	CpG island 400
Tssr7473	1	74854910 to 74854945	35	+	TSS region	transcription start site region 7473
Tssr7474	1	74854954 to 74854965	11	+	TSS region	transcription start site region 7474
Cdk5r2	1	74855029 to 74857732	2703	+	protein coding gene	cyclin-dependent kinase 5, regulatory subunit 2 (p39)
Tssr7475	1	74855203 to 74855216	13	+	TSS region	transcription start site region 7475
Tssr7476	1	74856345 to 74856365	20	+	TSS region	transcription start site region 7476
Tssr7477	1	74856542 to 74856552	10	+	TSS region	transcription start site region 7477
Tssr7478	1	74856623 to 74856626	3	+	TSS region	transcription start site region 7478
Tssr7479	1	74856628 to 74856651	23	+	TSS region	transcription start site region 7479
Cpgi401	1	74857252 to 74857443	191		CpG island	CpG island 401
Cpgi402	1	74858088 to 74859113	1025		CpG island	CpG island 402
Fev	1	74881509 to 74885419	3910	-	protein coding gene	FEV (ETS oncogene family)
Cpgi403	1	74881743 to 74883225	1482		CpG island	CpG island 403
Cpgi404	1	74884370 to 74886013	1643		CpG island	CpG island 404
Tssr7480	1	74884730 to 74884739	9	+	TSS region	transcription start site region 7480
Tssr7481	1	74885772 to 74885775	3	+	TSS region	transcription start site region 7481
Cryba2	1	74889934 to 74893143	3209	-	protein coding gene	crystallin, beta A2
Cpgi405	1	74892664 to 74893699	1035		CpG island	CpG island 405
Tssr12327	1	74892813 to 74892826	13	-	TSS region	transcription start site region 12327
Tssr12328	1	74893109 to 74893123	14	-	TSS region	transcription start site region 12328