Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:54150683-54468727

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hecw2	1	53806872 to 54195034	388162	-	protein coding gene	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
Gm37633	1	54152397 to 54155096	2699	-	unclassified gene	predicted gene, 37633
Tssr11681	1	54155320 to 54155325	5	-	TSS region	transcription start site region 11681
Tssr11682	1	54175842 to 54175849	7	-	TSS region	transcription start site region 11682
Cpgi254	1	54194095 to 54195415	1320		CpG island	CpG island 254
Tssr11683	1	54195189 to 54195211	22	-	TSS region	transcription start site region 11683
Gm25829	1	54249102 to 54249208	106	-	snRNA gene	predicted gene, 25829
Cpgi255	1	54250499 to 54250827	328		CpG island	CpG island 255
Tssr11684	1	54250591 to 54250603	12	-	TSS region	transcription start site region 11684
Tssr6701	1	54250673 to 54250699	26	+	TSS region	transcription start site region 6701
Ccdc150	1	54250683 to 54368727	118044	+	protein coding gene	coiled-coil domain containing 150
Tssr6702	1	54250813 to 54250844	31	+	TSS region	transcription start site region 6702
Tssr6703	1	54329996 to 54330005	9	+	TSS region	transcription start site region 6703
Gtf3c3	1	54396004 to 54438971	42967	-	protein coding gene	general transcription factor IIIC, polypeptide 3
Tssr11685	1	54396945 to 54396951	6	-	TSS region	transcription start site region 11685
Cpgi256	1	54438751 to 54439143	392		CpG island	CpG island 256
Tssr11686	1	54438940 to 54438994	54	-	TSS region	transcription start site region 11686
Tssr11687	1	54439003 to 54439014	11	-	TSS region	transcription start site region 11687
Gm34066	1	54442697 to 54447094	4397	-	lincRNA gene	predicted gene, 34066