Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:4889576-5090285

26 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tcea1	1	4857814 to 4897909	40095	+	protein coding gene	transcription elongation factor A (SII) 1
Gm37277	1	4905751 to 4906861	1110	-	unclassified gene	predicted gene, 37277
Rgs20	1	4909576 to 5070285	160709	-	protein coding gene	regulator of G-protein signaling 20
Tssr10892	1	4910240 to 4910244	4	-	TSS region	transcription start site region 10892
Gm17100	1	4927028 to 4927299	271	-	pseudogene	predicted gene 17100
Gm37079	1	4938576 to 4940710	2134	-	unclassified gene	predicted gene, 37079
Gm16041	1	4970857 to 4976820	5963	+	antisense lncRNA gene	predicted gene 16041
Tssr10893	1	4972390 to 4972416	26	-	TSS region	transcription start site region 10893
Cpgi11	1	5018203 to 5021131	2928		CpG island	CpG island 11
Tssr10894	1	5019342 to 5019397	55	-	TSS region	transcription start site region 10894
Tssr10895	1	5020299 to 5020336	37	-	TSS region	transcription start site region 10895
Cpgi12	1	5022819 to 5023058	239		CpG island	CpG island 12
Cpgi13	1	5023502 to 5023833	331		CpG island	CpG island 13
Gm17101	1	5063060 to 5064647	1587	+	pseudogene	predicted gene 17101
Tssr10896	1	5070281 to 5070288	7	-	TSS region	transcription start site region 10896
Tssr10897	1	5070293 to 5070304	11	-	TSS region	transcription start site region 10897
Tssr10898	1	5070305 to 5070314	9	-	TSS region	transcription start site region 10898
Tssr10899	1	5070336 to 5070338	2	-	TSS region	transcription start site region 10899
Cpgi14	1	5082921 to 5083542	621		CpG island	CpG island 14
Atp6v1h	1	5082978 to 5163213	80235	+	protein coding gene	ATPase, H+ transporting, lysosomal V1 subunit H
Tssr5811	1	5083105 to 5083160	55	+	TSS region	transcription start site region 5811
Tssr5812	1	5083169 to 5083186	17	+	TSS region	transcription start site region 5812
Tssr5813	1	5083206 to 5083217	11	+	TSS region	transcription start site region 5813
Tssr1	1	5083521 to 5083530	9	+	TSS region	transcription start site region 1
Tssr5814	1	5083560 to 5083587	27	+	TSS region	transcription start site region 5814
Tssr10900	1	5084523 to 5084544	21	-	TSS region	transcription start site region 10900