Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:35910998-36111005

32 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
D1Mit527	1	35919248 to 35919412	164		DNA segment	DNA Segment, Chr 1, Massachusetts Institute of Technology 527
Gm33176	1	35942013 to 35955016	13003	+	lncRNA gene	predicted gene, 33176
D1Mit465	1	35958456 to 35958593	137		DNA segment	DNA Segment, Chr 1, Massachusetts Institute of Technology-465
Gm8022	1	35958935 to 35959816	881	+	pseudogene	predicted gene 8022
Gm39622	1	35959999 to 35965098	5099	+	lncRNA gene	predicted gene, 39622
Tssr6242	1	35960014 to 35960052	38	+	TSS region	transcription start site region 6242
Gm37146	1	35981960 to 35986373	4413	-	lincRNA gene	predicted gene, 37146
Gm33222	1	36002985 to 36011044	8059	-	lincRNA gene	predicted gene, 33222
Tssr11237	1	36010998 to 36011005	7	-	TSS region	transcription start site region 11237
4930535G08Rik	1	36011072 to 36011894	822	+	lincRNA gene	RIKEN cDNA 4930535G08 gene
Gm39623	1	36016795 to 36021488	4693	+	lncRNA gene	predicted gene, 39623
Tssr11238	1	36017256 to 36017271	15	-	TSS region	transcription start site region 11238
D1Mit170.1	1	36026177 to 36026297	120		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 170.1
D1Mit170	1	36026270 to 36026373	103		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 170
Orch5	1	36026270 to 36026373	103		QTL	autoimmune orchitis resistance 5
Sluc15	1	36026270 to 36026373	103		QTL	susceptibility to lung cancer 15
Pgia1	1	36026270 to 36026373	103		QTL	proteoglycan induced arthritis 1
Gm38049	1	36029647 to 36031018	1371	-	unclassified gene	predicted gene, 38049
Cpgi132	1	36030622 to 36030928	306		CpG island	CpG island 132
D1Mit278	1	36057241 to 36057457	216		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 278
Gm39624	1	36058718 to 36066243	7525	-	lncRNA gene	predicted gene, 39624
Tssr11239	1	36063135 to 36063150	15	-	TSS region	transcription start site region 11239
Tssr6243	1	36063299 to 36063314	15	+	TSS region	transcription start site region 6243
Cpgi133	1	36067811 to 36069627	1816		CpG island	CpG island 133
Tssr6244	1	36068371 to 36068391	20	+	TSS region	transcription start site region 6244
Hs6st1	1	36068400 to 36106446	38046	+	protein coding gene	heparan sulfate 6-O-sulfotransferase 1
Tssr6245	1	36068643 to 36068672	29	+	TSS region	transcription start site region 6245
Tssr11240	1	36098552 to 36098561	9	-	TSS region	transcription start site region 11240
Cpgi134	1	36103456 to 36104295	839		CpG island	CpG island 134
Tssr6246	1	36104859 to 36104873	14	+	TSS region	transcription start site region 6246
Gm37335	1	36105384 to 36106446	1062	-	antisense lncRNA gene	predicted gene, 37335
Tssr6247	1	36105702 to 36105732	30	+	TSS region	transcription start site region 6247