Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:153118922-153432786

47 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Nmnat2	1	152954993 to 153119261	164268	+	protein coding gene	nicotinamide nucleotide adenylyltransferase 2
D1Mit396	1	153121012 to 153121136	124		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 396
Lamc2	1	153122756 to 153186447	63691	-	protein coding gene	laminin, gamma 2
Tssr14247	1	153127132 to 153127156	24	-	TSS region	transcription start site region 14247
Tssr14248	1	153130082 to 153130092	10	-	TSS region	transcription start site region 14248
Lamc2Dcr1a	1	153130839 to 153130959	120		DNA segment	DNA Segment, Chr 1, Derry C. Roopenian 1a
Gm17964	1	153132689 to 153133496	807	-	pseudogene	predicted gene, 17964
Tssr14249	1	153140998 to 153141003	5	-	TSS region	transcription start site region 14249
Cpgi864	1	153185770 to 153186467	697		CpG island	CpG island 864
Tssr14250	1	153186011 to 153186056	45	-	TSS region	transcription start site region 14250
Tssr14251	1	153186071 to 153186092	21	-	TSS region	transcription start site region 14251
Tssr14252	1	153186102 to 153186122	20	-	TSS region	transcription start site region 14252
Tssr14253	1	153186125 to 153186136	11	-	TSS region	transcription start site region 14253
Tssr14254	1	153186142 to 153186155	13	-	TSS region	transcription start site region 14254
Lamc1	1	153218922 to 153332786	113864	-	protein coding gene	laminin, gamma 1
Mdq2	1	153235430 to 153235430	0		QTL	mammary ductal QTL 2
Tssr14255	1	153249101 to 153249147	46	-	TSS region	transcription start site region 14255
Tssr14256	1	153262467 to 153262485	18	-	TSS region	transcription start site region 14256
Gm38009	1	153283850 to 153287190	3340	-	unclassified gene	predicted gene, 38009
Tssr9452	1	153300757 to 153300773	16	+	TSS region	transcription start site region 9452
Tssr14257	1	153302451 to 153302459	8	-	TSS region	transcription start site region 14257
Tssr9453	1	153305017 to 153305029	12	+	TSS region	transcription start site region 9453
Gm8818	1	153305432 to 153306478	1046	+	pseudogene	predicted pseudogene 8818
Cpgi865	1	153331894 to 153333644	1750		CpG island	CpG island 865
Tssr14258	1	153332699 to 153332722	23	-	TSS region	transcription start site region 14258
Tssr14259	1	153332724 to 153332804	80	-	TSS region	transcription start site region 14259
Tssr14260	1	153332809 to 153332820	11	-	TSS region	transcription start site region 14260
Tssr14261	1	153332885 to 153332894	9	-	TSS region	transcription start site region 14261
Tssr14262	1	153332916 to 153332927	11	-	TSS region	transcription start site region 14262
Tssr14263	1	153332960 to 153332967	7	-	TSS region	transcription start site region 14263
Tssr14264	1	153332996 to 153333013	17	-	TSS region	transcription start site region 14264
Tssr14265	1	153333021 to 153333028	7	-	TSS region	transcription start site region 14265
Obsty1	1	153334204 to 153334348	144		QTL	obesity 1
D1Mit43	1	153334204 to 153334348	144		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 43
Tssr9454	1	153351344 to 153351350	6	+	TSS region	transcription start site region 9454
Tssr9455	1	153376961 to 153376978	17	+	TSS region	transcription start site region 9455
Gm46246	1	153377857 to 153397005	19148	-	lncRNA gene	predicted gene, 46246
E330020D12Rik	1	153404827 to 153414233	9406	-	lncRNA gene	Riken cDNA E330020D12 gene
Tssr9456	1	153406481 to 153406501	20	+	TSS region	transcription start site region 9456
Tssr14266	1	153406520 to 153406543	23	-	TSS region	transcription start site region 14266
Tssr14267	1	153407784 to 153407790	6	-	TSS region	transcription start site region 14267
Tssr14268	1	153414227 to 153414233	6	-	TSS region	transcription start site region 14268
Tssr14269	1	153415131 to 153415161	30	-	TSS region	transcription start site region 14269
Cpgi866	1	153424879 to 153425640	761		CpG island	CpG island 866
Shcbp1l	1	153425162 to 153452574	27412	+	protein coding gene	Shc SH2-domain binding protein 1-like
Tssr9457	1	153425165 to 153425177	12	+	TSS region	transcription start site region 9457
Tssr9458	1	153425181 to 153425219	38	+	TSS region	transcription start site region 9458