Project measure / variable:   Schonfeld1   age

ID, description, units MPD:32380   age   age at testing (local parameter)   [wks]  
Data set, strains Schonfeld1   inbred   11 strains     sex: both
Procedure colony observation
Ontology mappings


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  STRAIN COMPARISON PLOT
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Schonfeld1 - age at testing (local parameter)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means9.90   wks 11.8   wks
Median of the strain means9.50   wks 12.5   wks
SD of the strain means± 1.26 ± 1.62
Coefficient of variation (CV)0.128 0.137
Min–max range of strain means9.00   –   13.0   wks 9.00   –   13.0   wks
Mean sample size per strain6.2   mice 5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 105.7341 105.7341 167.2522 < 0.0001
strain 8 3.2222 0.4028 0.6371 0.7445
sex:strain 8 140.8056 17.6007 27.8411 < 0.0001
Residuals 87 55.0 0.6322


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ f 10.5 1.58   10 0.5 0.151 9.0, 12.0 0.47
129X1/SvJ m 11.0 0.0   5 0.0 0.0 11.0, 11.0 -0.49
AKR/J f 9.0 0.0   5 0.0 0.0 9.0, 9.0 -0.71
BALB/cByJ f 10.0 1.05   10 0.333 0.105 9.0, 11.0 0.08
BALB/cByJ m 12.0 0.0   5 0.0 0.0 12.0, 12.0 0.12
BALB/cJ m 9.0 0.0   5 0.0 0.0 9.0, 9.0 -1.73
C3H/HeJ f 9.0 0.0   5 0.0 0.0 9.0, 9.0 -0.71
C3H/HeJ m 13.0 0.0   5 0.0 0.0 13.0, 13.0 0.74
C57BL/6ByJ f 10.0 0.0   5 0.0 0.0 10.0, 10.0 0.08
C57BL/6ByJ m 13.0 0.0   5 0.0 0.0 13.0, 13.0 0.74
C57BL/6J f 10.5 1.58   10 0.5 0.151 9.0, 12.0 0.47
C57BL/6J m 12.0 0.0   5 0.0 0.0 12.0, 12.0 0.12
DBA/1LacJ f 9.0 0.0   5 0.0 0.0 9.0, 9.0 -0.71
DBA/1LacJ m 13.0 0.0   5 0.0 0.0 13.0, 13.0 0.74
NZB/BlNJ f 13.0 0.0   5 0.0 0.0 13.0, 13.0 2.45
NZB/BlNJ m 9.0 0.0   5 0.0 0.0 9.0, 9.0 -1.73
PL/J f 9.0 0.0   5 0.0 0.0 9.0, 9.0 -0.71
PL/J m 13.0 0.0   5 0.0 0.0 13.0, 13.0 0.74
SWR/J f 9.0 0.0   5 0.0 0.0 9.0, 9.0 -0.71
SWR/J m 13.0 0.0   5 0.0 0.0 13.0, 13.0 0.74


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ f 10.5 0.2514 10.9997 10.0003
129X1/SvJ m 11.0 0.3556 11.7068 10.2932
BALB/cByJ f 10.0 0.2514 10.4997 9.5003
BALB/cByJ m 12.0 0.3556 12.7068 11.2932
C3H/HeJ f 9.0 0.3556 9.7068 8.2932
C3H/HeJ m 13.0 0.3556 13.7068 12.2932
C57BL/6ByJ f 10.0 0.3556 10.7068 9.2932
C57BL/6ByJ m 13.0 0.3556 13.7068 12.2932
C57BL/6J f 10.5 0.2514 10.9997 10.0003
C57BL/6J m 12.0 0.3556 12.7068 11.2932
DBA/1LacJ f 9.0 0.3556 9.7068 8.2932
DBA/1LacJ m 13.0 0.3556 13.7068 12.2932
NZB/BlNJ f 13.0 0.3556 13.7068 12.2932
NZB/BlNJ m 9.0 0.3556 9.7068 8.2932
PL/J f 9.0 0.3556 9.7068 8.2932
PL/J m 13.0 0.3556 13.7068 12.2932
SWR/J f 9.0 0.3556 9.7068 8.2932
SWR/J m 13.0 0.3556 13.7068 12.2932


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ both 10.75 0.2177 11.1828 10.3172
BALB/cByJ both 11.0 0.2177 11.4328 10.5672
C3H/HeJ both 11.0 0.2514 11.4997 10.5003
C57BL/6ByJ both 11.5 0.2514 11.9997 11.0003
C57BL/6J both 11.25 0.2177 11.6828 10.8172
DBA/1LacJ both 11.0 0.2514 11.4997 10.5003
NZB/BlNJ both 11.0 0.2514 11.4997 10.5003
PL/J both 11.0 0.2514 11.4997 10.5003
SWR/J both 11.0 0.2514 11.4997 10.5003




  GWAS USING LINEAR MIXED MODELS