Project measure / variable:   CSNA03   pct_correct_in_acq_JAX

ID, description, units MPD:110465   pct_correct_in_acq_JAX   percentage of responses that are correct (reversal learning assay), founders   [%]  acquisition  
Data set, strains CSNA03   inbred w/CC8   8 strains     sex: both     age:
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA03 - percentage of responses that are correct (reversal learning assay), founders acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means65.03   % 68.03   %
Median of the strain means63.52   % 68.43   %
SD of the strain means± 4.1466 ± 7.5738
Coefficient of variation (CV)0.0638 0.1113
Min–max range of strain means60.12   –   71.36   % 54.35   –   80.56   %
Mean sample size per strain7.6   mice 6.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 362.2911 362.2911 2.0686 0.1535
strain 7 1127.4736 161.0677 0.9196 0.4947
sex:strain 7 1569.4447 224.2064 1.2802 0.2678
Residuals 100 17514.0696 175.1407


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 68.33 4.1332   3 2.3863 0.0605 63.64, 71.43 0.8
129S1/SvImJ m 80.56 18.098   4 9.0489 0.2246 59.09, 100.0 1.65
A/J f 71.36 15.386   6 6.2813 0.2156 55.12, 95.0 1.53
A/J m 54.35 18.156   5 8.1198 0.3341 29.889, 73.85 -1.81
C57BL/6J f 61.98 13.44   14 3.592 0.2169 39.041, 90.0 -0.74
C57BL/6J m 63.65 12.875   11 3.8819 0.2023 45.033, 90.0 -0.58
CAST/EiJ f 62.03 12.668   10 4.0061 0.2042 47.535, 90.0 -0.72
CAST/EiJ m 66.48 6.7151   8 2.3742 0.101 58.18, 75.68 -0.2
NOD/ShiLtJ f 64.8 17.272   8 6.1067 0.2665 44.444, 95.0 -0.06
NOD/ShiLtJ m 70.38 13.181   11 3.9743 0.1873 50.68, 90.0 0.31
NZO/HlLtJ f 69.4 13.902   3 8.0262 0.2003 58.33, 85.0 1.05
NZO/HlLtJ m 70.95 10.338   2   7.31 0.1457 63.64, 78.26 0.39
PWK/PhJ f 62.23 11.957   9 3.9857 0.1921 48.305, 80.0 -0.68
PWK/PhJ m 65.77 11.317   8 4.0012 0.1721 42.478, 80.0 -0.3
WSB/EiJ f 60.12 12.508   8 4.4223 0.2081 36.283, 73.02 -1.18
WSB/EiJ m 72.11 12.445   6 5.0805 0.1726 58.21, 95.0 0.54


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 68.3333333333 7.6406957847 83.4922561518 53.1744105148
129S1/SvImJ m 80.565 6.6170366521 93.6930122548 67.4369877452
A/J f 71.36 5.4027878023 82.0789771205 60.6410228795
A/J m 54.3478 5.9184575055 66.0898511245 42.6057488755
C57BL/6J f 61.9759285714 3.5369548669 68.9931462896 54.9587108533
C57BL/6J m 63.6546363636 3.9902232362 71.5711256168 55.7381471105
CAST/EiJ f 62.0265 4.1849814363 70.3293839752 53.7236160248
CAST/EiJ m 66.485 4.6789514881 75.7679064889 57.2020935111
NOD/ShiLtJ f 64.80175 4.6789514881 74.0846564889 55.5188435111
NOD/ShiLtJ m 70.3754545455 3.9902232362 78.2919437986 62.4589652923
NZO/HlLtJ f 69.3966666667 7.6406957847 84.5555894852 54.2377438482
NZO/HlLtJ m 70.95 9.3579029762 89.5158129778 52.3841870222
PWK/PhJ f 62.2326666667 4.4113577681 70.9846748366 53.4806584968
PWK/PhJ m 65.771 4.6789514881 75.0539064889 56.4880935111
WSB/EiJ f 60.120375 4.6789514881 69.4032814889 50.8374685111
WSB/EiJ m 72.105 5.4027878023 82.8239771205 61.3860228795


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 74.4491666667 5.0538452224 84.475851647 64.4224816863
A/J both 62.8539 4.0068146726 70.8033061904 54.9044938096
C57BL/6J both 62.8152824675 2.666080044 68.104709341 57.5258555941
CAST/EiJ both 64.25575 3.1387360772 70.4829129814 58.0285870186
NOD/ShiLtJ both 67.5886022727 3.074673499 73.6886669236 61.4885376219
NZO/HlLtJ both 70.1733333333 6.040500397 82.1575140786 58.189152588
PWK/PhJ both 64.0018333333 3.2153018671 70.3809006611 57.6227660056
WSB/EiJ both 66.1126875 3.5736082279 73.2026244424 59.0227505576




  GWAS USING LINEAR MIXED MODELS