Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000




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540 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Deaf1 7 141297180 to 141327690 30510 - protein coding gene DEAF1, transcription factor
Decr1 4 15917240 to 15945507 28267 - protein coding gene 2,4-dienoyl CoA reductase 1, mitochondrial
Decr2 17 26081211 to 26090164 8953 - protein coding gene 2-4-dienoyl-Coenzyme A reductase 2, peroxisomal
Dedd 1 171329145 to 171342331 13186 + protein coding gene death effector domain-containing
Dedd2 7 25202838 to 25219873 17035 - protein coding gene death effector domain-containing DNA binding protein 2
Def6 17 28207778 to 28228608 20830 + protein coding gene differentially expressed in FDCP 6
Def8 8 123442956 to 123463899 20943 + protein coding gene differentially expressed in FDCP 8
Defa1 8 syntenic protein coding gene defensin, alpha 1
Defa10 8 syntenic protein coding gene defensin, alpha, 10
Defa11 8 syntenic protein coding gene defensin, alpha, 11
Defa12 8 syntenic protein coding gene defensin, alpha, 12
Defa13 8 syntenic protein coding gene defensin, alpha, 13
Defa14 8 syntenic protein coding gene defensin, alpha, 14
Defa15 8 syntenic protein coding gene defensin, alpha, 15
Defa16 8 syntenic protein coding gene defensin, alpha, 16
Defa17 8 21655780 to 21656735 955 + protein coding gene defensin, alpha, 17
Defa2 8 21378517 to 21379495 978 + protein coding gene defensin, alpha, 2
Defa20 8 21509258 to 21510237 979 + protein coding gene defensin, alpha, 20
Defa21 8 21025545 to 21026516 971 + protein coding gene defensin, alpha, 21
Defa22 8 21162277 to 21163249 972 + protein coding gene defensin, alpha, 22
Defa23 8 21055047 to 21056016 969 + protein coding gene defensin, alpha, 23
Defa24 8 21734494 to 21735471 977 + protein coding gene defensin, alpha, 24
Defa25 8 21084442 to 21085285 843 + protein coding gene defensin, alpha, 25
Defa26 8 21618183 to 21618972 789 + protein coding gene defensin, alpha, 26
Defa27 8 21315546 to 21316387 841 + protein coding gene defensin, alpha, 27
Defa28 8 21582960 to 21583867 907 + protein coding gene defensin, alpha, 28
Defa29 8 21325888 to 21327020 1132 - protein coding gene defensin, alpha, 29
Defa3 8 21287409 to 21288377 968 + protein coding gene defensin, alpha, 3
Defa30 8 21134650 to 21135598 948 + protein coding gene defensin, alpha, 30
Defa31 8 21191614 to 21192549 935 + protein coding gene defensin, alpha, 31
Defa32 8 21529032 to 21530012 980 + protein coding gene defensin, alpha, 32
Defa33 8 21391811 to 21392791 980 + protein coding gene defensin, alpha, 33
Defa34 8 21665797 to 21666732 935 + protein coding gene defensin, alpha, 34
Defa35 8 21065038 to 21065996 958 + protein coding gene defensin, alpha, 35
Defa36 8 21427428 to 21428386 958 + protein coding gene defensin, alpha, 36
Defa37 8 21565386 to 21566349 963 + protein coding gene defensin, alpha, 37
Defa38 8 21095074 to 21096050 976 - protein coding gene defensin, alpha, 38
Defa39 8 21702524 to 21703647 1123 - protein coding gene defensin, alpha, 39
Defa4 8 syntenic protein coding gene defensin, alpha, 4
Defa40 8 21249762 to 21250461 699 + protein coding gene defensin, alpha, 40
Defa41 8 21201604 to 21202446 842 + protein coding gene defensin, alpha, 41
Defa42 8 21455427 to 21456517 1090 - protein coding gene defensin, alpha, 42
Defa43 8 21593487 to 21594465 978 - protein coding gene defensin, alpha, 43
Defa5 8 21297439 to 21298375 936 + protein coding gene defensin, alpha, 5
Defa6 8 syntenic protein coding gene defensin, alpha, 6
Defa7 8 syntenic protein coding gene defensin, alpha, 7
Defa8 8 syntenic protein coding gene defensin, alpha, 8
Defa9 8 syntenic protein coding gene defensin, alpha, 9
Defa-ps1 8 21695012 to 21695853 841 + pseudogene defensin, alpha, pseudogene 1
Defa-ps10 8 21722070 to 21722240 170 + pseudogene defensin, alpha, pseudogene 10
Defa-ps11 8 21749175 to 21750000 825 + pseudogene defensin, alpha, pseudogene 11
Defa-ps12 8 19210462 to 19212760 2298 + pseudogene defensin, alpha, pseudogene 12
Defa-ps13 8 19300677 to 19304794 4117 + pseudogene defensin, alpha, pseudogene 13
Defa-ps14 8 19422506 to 19423444 938 + pseudogene defensin, alpha, pseudogene 14
Defa-ps15 8 19472893 to 19474732 1839 - pseudogene defensin, alpha, pseudogene 15
Defa-ps16 8 21342586 to 21342756 170 + pseudogene defensin, alpha, pseudogene 16
Defa-ps17 8 21473251 to 21473421 170 + pseudogene defensin, alpha, pseudogene 17
Defa-ps18 8 21445069 to 21445910 841 + pseudogene defensin, alpha, pseudogene 18
Defa-ps2 8 syntenic pseudogene defensin, alpha, pseudogene 2
Defa-ps3 8 21078141 to 21078846 705 + pseudogene defensin, alpha, pseudogene 3
Defa-ps4 8 21119166 to 21119348 182 + pseudogene defensin, alpha, pseudogene 4
Defa-ps5 8 21218984 to 21219763 779 + pseudogene defensin, alpha, pseudogene 5
Defa-ps6 8 21225406 to 21225577 171 + pseudogene defensin, alpha, pseudogene 6
Defa-ps7 8 21232066 to 21232233 167 - pseudogene defensin, alpha, pseudogene 7
Defa-ps8 8 21270693 to 21271997 1304 + pseudogene defensin, alpha, pseudogene 8
Defa-ps9 8 21688648 to 21689428 780 + pseudogene defensin, alpha, pseudogene 9
Defa-rs10 8 syntenic protein coding gene defensin, alpha, related sequence 10
Defa-rs11 8 syntenic unclassified other genome feature defensin, alpha, related sequence 11
Defa-rs12 8 syntenic protein coding gene defensin, alpha, related sequence 12
Defa-rs2 8 syntenic protein coding gene defensin, alpha, related sequence 2
Defa-rs4 8 syntenic protein coding gene defensin, alpha,, related sequence 4
Defa-rs5 8 syntenic unclassified other genome feature defensin, alpha, related sequence 5
Defa-rs6 8 syntenic protein coding gene defensin, alpha, related sequence 6
Defa-rs8 8 syntenic unclassified other genome feature defensin, alpha, related sequence 8
Defa-rs9 8 syntenic unclassified other genome feature defensin, alpha, related sequence 9
Defb1 8 21776599 to 21795185 18586 + protein coding gene defensin beta 1
Defb10 8 21858901 to 21862011 3110 + protein coding gene defensin beta 10
Defb11 8 21905376 to 21906412 1036 - protein coding gene defensin beta 11
Defb12 8 19111931 to 19114833 2902 - protein coding gene defensin beta 12
Defb13 8 21946762 to 21948622 1860 + protein coding gene defensin beta 13
Defb14 8 19194357 to 19195212 855 + protein coding gene defensin beta 14
Defb15 8 21929813 to 21932710 2897 - protein coding gene defensin beta 15
Defb18 1 18236473 to 18237443 970 - protein coding gene defensin beta 18
Defb19 2 152576086 to 152580312 4226 - protein coding gene defensin beta 19
Defb2 8 21839926 to 21843482 3556 + protein coding gene defensin beta 2
Defb20 2 152477063 to 152479934 2871 + protein coding gene defensin beta 20
Defb21 2 152572744 to 152574944 2200 + protein coding gene defensin beta 21
Defb22 2 152485666 to 152490138 4472 - protein coding gene defensin beta 22
Defb23 2 152459055 to 152464620 5565 - protein coding gene defensin beta 23
Defb25 2 152622356 to 152623053 697 - protein coding gene defensin beta 25
Defb26 2 152507798 to 152511692 3894 - protein coding gene defensin beta 26
Defb28 2 152518255 to 152521447 3192 + protein coding gene defensin beta 28
Defb29 2 152538714 to 152540041 1327 - protein coding gene defensin beta 29
Defb3 8 19293360 to 19295291 1931 + protein coding gene defensin beta 3
Defb30 14 63034087 to 63037846 3759 - protein coding gene defensin beta 30
Defb33 8 20892669 to 20897723 5054 + protein coding gene defensin beta 33
Defb34 8 19123752 to 19126540 2788 + protein coding gene defensin beta 34
Defb35 8 21938352 to 21940878 2526 + protein coding gene defensin beta 35
Defb36 2 152604327 to 152612729 8402 + protein coding gene defensin beta 36
Defb37 8 18986233 to 18991055 4822 - protein coding gene defensin beta 37
Defb38 8 19023464 to 19026529 3065 - protein coding gene defensin beta 38
Defb39 8 19052826 to 19064810 11984 - protein coding gene defensin beta 39
Defb4 8 19198706 to 19201545 2839 + protein coding gene defensin beta 4
Defb40 8 18974940 to 18978116 3176 - protein coding gene defensin beta 40
Defb41 1 18250980 to 18265138 14158 - protein coding gene defensin beta 41
Defb42 14 63046991 to 63048606 1615 + protein coding gene defensin beta 42
Defb43 14 63011771 to 63018088 6317 + protein coding gene defensin beta 43
Defb44-ps 1 18210053 to 18223564 13511 - pseudogene defensin beta 44, pseudogene
Defb45 2 152593191 to 152596485 3294 - protein coding gene defensin beta 45
Defb46 8 19239916 to 19242143 2227 + protein coding gene defensin beta 46
Defb47 14 62998077 to 63001160 3083 + protein coding gene defensin beta 47
Defb48 14 62977524 to 62984510 6986 - protein coding gene defensin beta 48
Defb5 8 19247592 to 19250828 3236 + protein coding gene defensin beta 5
Defb50 8 21823539 to 21831296 7757 + protein coding gene defensin beta 50
Defb6 8 19225478 to 19228209 2731 + protein coding gene defensin beta 6
Defb7 8 19495097 to 19497775 2678 + protein coding gene defensin beta 7
Defb8 8 19445769 to 19447606 1837 - protein coding gene defensin beta 8
Defb9 8 21881713 to 21885421 3708 - protein coding gene defensin beta 9
Degs1 1 182275770 to 182282759 6989 - protein coding gene delta(4)-desaturase, sphingolipid 1
Degs2 12 108686792 to 108702306 15514 - protein coding gene delta(4)-desaturase, sphingolipid 2
Dek 13 47084775 to 47106201 21426 - protein coding gene DEK oncogene (DNA binding)
Del(10)12H 10 syntenic chromosomal deletion deletion, Chr 10, Harwell 12
Del(10)13H 10 syntenic chromosomal deletion deletion, Chr 10, Harwell 13
Del(10)1H 10 syntenic chromosomal deletion deletion, Chr 10, Harwell 1
Del(10)21H 10 syntenic chromosomal deletion deletion, Chr 10, Harwell 21
Del(10)2H 10 syntenic chromosomal deletion deletion, Chr 10, Harwell 2
Del(10)41H 10 syntenic chromosomal deletion deletion, Chr 10, Harwell 41
Del(10)65H 10 syntenic chromosomal deletion deletion, Chr 10, Harwell 65
Del(10)69H 10 syntenic chromosomal deletion deletion, Chr 10, Harwell 69
Del(10)77H 10 syntenic chromosomal deletion deletion, Chr 10, Harwell 77
Del(10)8H 10 syntenic chromosomal deletion deletion, Chr 10, Harwell 8
Del(10)9H 10 syntenic chromosomal deletion deletion, Chr 10, Harwell 9
Del(10Grin3b-Tmem259)1Zang 10 syntenic chromosomal deletion deletion, Chr 10, Dongxian Zhang 1
Del(10Mcm9-Asf1a)1Byg 10 53596600 to 53620013 23413 chromosomal deletion gene trap XE518 induced deletion 1, BayGenomics
Del(10Prmt2-Col6a1)1Yah 10 76207226 to 76726044 518818 chromosomal deletion deletion, Chr 10, Yann Herault 1
Del(10Prmt2-Cstb)4Yah 10 76207226 to 78427622 2220396 cytogenetic marker deletion, Chr 10, Yann Herault 4
Del(10Prmt2-Pdxk)4Yey 10 76207226 to 78464948 2257722 chromosomal deletion deletion, Chr 10, Y Eugene Yu 4
Del(10Prtn3-Elane)1Ctnp 10 79879667 to 79888216 8549 chromosomal deletion Deletion, Chr 10, Christine T N Pham 1
Del(10Prtn3-Elane)1Deje 10 syntenic chromosomal deletion Deletion, Chr 10, Dieter E Jenne 1
Del(10Taar2-Taar9)1Tboz 10 23938572 to 24109534 170962 chromosomal deletion deletion, Chr 10, Thomas Bozza 1
Del(10Taar2-Taar9)2Tboz 10 23938572 to 24109534 170962 chromosomal deletion deletion, Chr 10, Thomas Bozza 2
Del(11)10Brd 11 syntenic chromosomal deletion deletion, Chr 11, Bradley 10
Del(11)11Brd 11 syntenic chromosomal deletion deletion, Chr 11, Bradley 11
Del(11)12Brd 11 syntenic chromosomal deletion deletion, Chr 11, Bradley 12
Del(11)13Brd 11 syntenic chromosomal deletion deletion, Chr 11, Bradley 13
Del(11)14Brd 11 syntenic chromosomal deletion deletion, Chr 11, Bradley 14
Del(11)15Brd 11 syntenic chromosomal deletion deletion, Chr 11, Bradley 15
Del(11)16Brd 11 syntenic chromosomal deletion deletion, Chr 11, Bradley 16
Del(11)1Brd 11 syntenic chromosomal deletion deletion, Chr 11, Bradley 1
Del(11)9Brd 11 syntenic chromosomal deletion deletion, Chr 11, Bradley 9
Del(11Arf2-Kansl1)8Yah 11 syntenic chromosomal deletion deletion, Chr 11, Yann Herault 8
Del(1)1Brk 1 syntenic chromosomal deletion deletion, Chr 1, Jane Barker 1
Del(11Chad-Hoxb1)19Brd 11 94565074 to 96368256 1803182 complex/cluster/region deletion, Chr 11, Bradley 19
Del(11Cops3-Gid4)2Jrl 11 syntenic complex/cluster/region deletion, Chr 11, James R Lupski 2
Del(11Cops3-Gid4)3Jrl 11 59817795 to 60445277 627482 cytogenetic marker deletion, Chr 11, James R Lupski 3
Del(11Cops3-Gid4)4Jrl 11 59817795 to 60445277 627482 complex/cluster/region deletion, Chr 11, James R Lupski 4
Del(11Cops3-Rnf112)1Jrl 11 59817795 to 61454131 1636336 complex/cluster/region deletion, Chr 11, James R Lupski 1
Del(11Cxcl16-Zmynd15)1Ifc 11 syntenic chromosomal deletion deletion, Chr 11, Israel F Charo
Del(11Gast-Hsd17b1)5Brd 11 syntenic cytogenetic marker deletion, Chr 11, Bradley 5
Del(11Hoxb3-Hoxb4)1Karl 11 96318267 to 96347930 29663 cytogenetic marker deletion, Chr 11, Stefan Karlsson 1
Del(11Irf1-D11Mit23)1Rub 11 53770014 to 54236047 466033 cytogenetic marker deletion, Chr 11, Edward M Rubin 1
Del(11Jmjd6-Mettl23)1Flv 11 syntenic chromosomal deletion deletion, Chr 11, Richard A Flavell 1
Del(11Jmjd6-Mettl23)1Ysfk 11 syntenic chromosomal deletion deletion, Chr 11, Yoshinori Fukui 1
Del(11Krt31c)2Tmm 11 syntenic chromosomal deletion deletion, Chr 11, Thomas M Magin 2
Del(11Mpo-Chad)18Brd 11 87793784 to 94569127 6775343 cytogenetic marker deletion, Chr 11, Bradley 18
Del(11Nlrp1a-Nlrp1c-ps)1Smas 11 71092236 to 71285232 192996 chromosomal deletion deletion, Chr 11, Seth Masters
Del(11Nme2-Nme1)1Zou 11 syntenic chromosomal deletion deletion, Chr 11, Xiaoming Zou 1
Del(11Nmur2-Sparc)2Anjm 11 syntenic cytogenetic marker deletion, Chr 11, Andrew N J McKenzie
Del(11Sparc-Gpx3)91Anjm 11 54902854 to 55420080 517226 cytogenetic marker deletion, Chr 11, Andrew N J McKenzie
Del(11Stat5a-Stat5b)1Mam 11 syntenic chromosomal deletion deletion, chr 11, Lothar Hennighausen 1
Del(1)1Tac 1 syntenic cytogenetic marker deletion, Chr 1, Taconic 1
Del(12)75H 12 syntenic chromosomal deletion deletion, Chr 12, Harwell 75
Del(1)27H 1 syntenic chromosomal deletion deletion, Chr 1, Harwell 27
Del(12Bdkrb2-Bdkrb1)1Mki 12 syntenic chromosomal deletion deletion, Chr 12, Masao Kakoki 1
Del(1)2Lt 1 39088990 to 39114692 25702 cytogenetic marker deletion, Chr 1, Edward H Leiter 2
Del(12Mir379-Mir410)2Arte 12 syntenic cytogenetic marker deletion, Chr 12, TaconicArtemis 2
Del(13)1Mgld 13 syntenic chromosomal deletion deletion, Chr 13, Michael N Gould
Del(13)36H 13 syntenic chromosomal deletion deletion, Chr 13, Harwell 36
Del(1)33H 1 syntenic chromosomal deletion deletion, Chr 1, Harwell 33
Del(13)52H 13 syntenic chromosomal deletion deletion, Chr 13, Harwell 52
Del(13)80H 13 syntenic chromosomal deletion deletion, Chr 13, Harwell 80
Del(13)81H 13 syntenic chromosomal deletion deletion, Chr 13, Harwell 81
Del(13F2rl1-F2r)1Cgh 13 syntenic chromosomal deletion deletion, Chr 13, Shaun R Coughlin 1
Del(1)3H 1 syntenic chromosomal deletion deletion, Chr 1, Harwell 3
Del(13Naip1-Naip5)1Vnce 13 100246323 to 100407770 161447 chromosomal deletion deletion, Chr 13, Russell Vance 1
Del(13Simc1-B4galt7)2Dja 13 54503779 to 55610443 1106664 chromosomal deletion deletion, Chr 13, David J Adams 2
Del(14)10H 14 syntenic chromosomal deletion deletion, Chr 14, Harwell 10
Del(14)1.1Hsak 14 syntenic chromosomal deletion deletion, Chr 14, Hitoshi Sakano 1.1
Del(14)14H 14 syntenic chromosomal deletion deletion, Chr 14, Harwell 14
Del(14)15H 14 syntenic chromosomal deletion deletion, Chr 14, Harwell 15
Del(14)19H 14 syntenic chromosomal deletion deletion, Chr 14, Harwell 19
Del(14)1Tshir 14 syntenic cytogenetic marker deletion, Chr 14, Toshihiko Shiroishi 1
Del(14)22H 14 syntenic chromosomal deletion deletion, Chr 14, Harwell 22
Del(14)23H 14 syntenic chromosomal deletion deletion, Chr 14, Harwell 23
Del(14)28H 14 syntenic chromosomal deletion deletion, Chr 14, Harwell 28
Del(14)29H 14 syntenic chromosomal deletion deletion, Chr 14, Harwell 29
Del(1)42H 1 syntenic chromosomal deletion deletion, Chr 1, Harwell 42
Del(14)30H 14 syntenic chromosomal deletion deletion, Chr 14, Harwell 30
Del(14)31H 14 syntenic chromosomal deletion deletion, Chr 14, Harwell 31
Del(14)32H 14 syntenic chromosomal deletion deletion, Chr 14, Harwell 32