Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:73931592-74180690

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hcfc1 X 73942792 to 73966357 23565 - protein coding gene host cell factor C1
Tssr163603 X 73945549 to 73945554 5 - TSS region transcription start site region 163603
Tssr163604 X 73950439 to 73950443 4 - TSS region transcription start site region 163604
Cpgi22786 X 73965827 to 73966134 307 CpG island CpG island 22786
Tssr163605 X 73965994 to 73966044 50 - TSS region transcription start site region 163605
Tssr163606 X 73966329 to 73966376 47 - TSS region transcription start site region 163606
Cpgi22787 X 73966460 to 73967874 1414 CpG island CpG island 22787
Tssr161303 X 73966485 to 73966506 21 + TSS region transcription start site region 161303
Tssr163607 X 73966750 to 73966753 3 - TSS region transcription start site region 163607
Tssr163608 X 73966973 to 73967008 35 - TSS region transcription start site region 163608
Gm8545 X 74006702 to 74007502 800 + pseudogene predicted gene 8545
Irak1 X 74013914 to 74023918 10004 - protein coding gene interleukin-1 receptor-associated kinase 1
Tssr163609 X 74014903 to 74014917 14 - TSS region transcription start site region 163609
Cpgi22788 X 74023301 to 74024369 1068 CpG island CpG island 22788
Mir5132 X 74023528 to 74023598 70 - miRNA gene microRNA 5132
Tssr163610 X 74023797 to 74023808 11 - TSS region transcription start site region 163610
Tssr163611 X 74023817 to 74023839 22 - TSS region transcription start site region 163611
Mir718 X 74023849 to 74023936 87 - miRNA gene microRNA 718
Tssr163612 X 74023908 to 74023917 9 - TSS region transcription start site region 163612
Mecp2 X 74026592 to 74085690 59098 - protein coding gene methyl CpG binding protein 2
Tssr161304 X 74027339 to 74027340 1 + TSS region transcription start site region 161304
Tssr163613 X 74059366 to 74059370 4 - TSS region transcription start site region 163613
Tssr163614 X 74073485 to 74073489 4 - TSS region transcription start site region 163614
Tssr163615 X 74074898 to 74074936 38 - TSS region transcription start site region 163615
Cpgi22789 X 74084703 to 74085866 1163 CpG island CpG island 22789
Tssr163616 X 74085340 to 74085357 17 - TSS region transcription start site region 163616
Tssr5637 X 74085554 to 74085563 9 - TSS region transcription start site region 5637
Tssr163617 X 74085586 to 74085652 66 - TSS region transcription start site region 163617
Tssr163618 X 74085656 to 74085672 16 - TSS region transcription start site region 163618
Tssr161305 X 74127463 to 74127469 6 + TSS region transcription start site region 161305
Opn1mw X 74127466 to 74150756 23290 + protein coding gene opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)
Gm6758 X 74135133 to 74136187 1054 - pseudogene predicted gene 6758
Tex28 X 74150944 to 74167838 16894 - protein coding gene testis expressed 28
Rpl3-ps2 X 74170653 to 74171866 1213 + pseudogene ribosomal protein L3, pseudogene 2
Tssr161306 X 74177225 to 74177236 11 + TSS region transcription start site region 161306
Tssr161307 X 74177252 to 74177268 16 + TSS region transcription start site region 161307
Tktl1 X 74177259 to 74208498 31239 + protein coding gene transketolase-like 1