Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:95562628-95770551

33 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Psl6	9	65133909 to 95640755	30506846		QTL	promotion susceptibility QTL 6
Tssr86569	9	95563754 to 95563757	3	+	TSS region	transcription start site region 86569
Tssr86570	9	95564468 to 95564472	4	+	TSS region	transcription start site region 86570
C730029A08Rik	9	95566174 to 95568022	1848		unclassified non-coding RNA gene	RIKEN cDNA C730029A08 gene
Tssr90923	9	95577697 to 95577730	33	-	TSS region	transcription start site region 90923
Gm32542	9	95581428 to 95593332	11904	+	lncRNA gene	predicted gene, 32542
Tssr86571	9	95581484 to 95581502	18	+	TSS region	transcription start site region 86571
Cpgi22153	9	95598293 to 95598575	282		CpG island	CpG island 22153
Tssr90924	9	95606664 to 95606665	1	-	TSS region	transcription start site region 90924
Tssr90925	9	95614731 to 95614751	20	-	TSS region	transcription start site region 90925
Gm16126	9	95618911 to 95648471	29560	-	antisense lncRNA gene	predicted gene 16126
Gm28164	9	95621978 to 95622419	441	-	pseudogene	predicted gene 28164
Gm25582	9	95624502 to 95624611	109	+	snoRNA gene	predicted gene, 25582
Gm16127	9	95636972 to 95638265	1293	-	unclassified non-coding RNA gene	predicted gene 16127
Cpgi22154	9	95637335 to 95638256	921		CpG island	CpG island 22154
Tssr86572	9	95637412 to 95637424	12	+	TSS region	transcription start site region 86572
Tssr86573	9	95637623 to 95637632	9	+	TSS region	transcription start site region 86573
Pcolce2	9	95637628 to 95695551	57923	+	protein coding gene	procollagen C-endopeptidase enhancer 2
Tssr86574	9	95637652 to 95637656	4	+	TSS region	transcription start site region 86574
Tssr86575	9	95637731 to 95637746	15	+	TSS region	transcription start site region 86575
Skts6	9	95640645 to 95640755	110		QTL	skin tumor susceptibility 6
D9Mit76	9	95640645 to 95640755	110		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 76
Cpgi22155	9	95670022 to 95670351	329		CpG island	CpG island 22155
Itpa-ps2	9	95675429 to 95676017	588	-	pseudogene	inosine triphosphatase (nucleoside triphosphate pyrophosphatase) pseudogene 2
Trpc1	9	95705082 to 95750375	45293	-	protein coding gene	transient receptor potential cation channel, subfamily C, member 1
Gm39407	9	95706908 to 95708689	1781	+	lncRNA gene	predicted gene, 39407
Cpgi22156	9	95749412 to 95750584	1172		CpG island	CpG island 22156
Tssr90926	9	95750295 to 95750333	38	-	TSS region	transcription start site region 90926
Tssr90927	9	95750335 to 95750368	33	-	TSS region	transcription start site region 90927
Pls1	9	95752642 to 95845306	92664	-	protein coding gene	plastin 1 (I-isoform)
Tssr90928	9	95753874 to 95753885	11	-	TSS region	transcription start site region 90928
Tssr90929	9	95753922 to 95753930	8	-	TSS region	transcription start site region 90929
Tssr90930	9	95754115 to 95754129	14	-	TSS region	transcription start site region 90930