Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:57890112-58012865

29 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Fecq4	9	47631726 to 57897921	10266195		QTL	fecundity QTL 4
Bbaa9	9	57897764 to 71574472	13676708		QTL	B.burgdorferi-associated arthritis 9
Brm1	9	57897764 to 57897921	157		QTL	brachyury modifier 1
D9Mit48	9	57897764 to 57897921	157		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 48
Neogq1	9	57897764 to 86239920	28342156		QTL	neonatal growth QTL 1
Cpgi21836	9	57910465 to 57911220	755		CpG island	CpG island 21836
Tssr85332	9	57910473 to 57910490	17	+	TSS region	transcription start site region 85332
Tssr85333	9	57910506 to 57910530	24	+	TSS region	transcription start site region 85333
Tssr85334	9	57910542 to 57910552	10	+	TSS region	transcription start site region 85334
Tssr85335	9	57910974 to 57911023	49	+	TSS region	transcription start site region 85335
Ubl7	9	57910979 to 57929968	18989	+	protein coding gene	ubiquitin-like 7 (bone marrow stromal cell-derived)
Tssr85336	9	57911025 to 57911036	11	+	TSS region	transcription start site region 85336
Tssr85337	9	57911039 to 57911050	11	+	TSS region	transcription start site region 85337
Tssr85338	9	57911094 to 57911095	1	+	TSS region	transcription start site region 85338
Tssr85339	9	57911102 to 57911115	13	+	TSS region	transcription start site region 85339
Tssr85340	9	57911139 to 57911150	11	+	TSS region	transcription start site region 85340
Tssr85341	9	57922470 to 57922502	32	+	TSS region	transcription start site region 85341
Tssr85342	9	57922520 to 57922538	18	+	TSS region	transcription start site region 85342
Tssr85343	9	57922567 to 57922581	14	+	TSS region	transcription start site region 85343
Cpgi21837	9	57939589 to 57941328	1739		CpG island	CpG island 21837
Tssr85344	9	57940104 to 57940120	16	+	TSS region	transcription start site region 85344
Sema7a	9	57940135 to 57962865	22730	+	protein coding gene	sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A
Tssr89838	9	57946576 to 57946587	11	-	TSS region	transcription start site region 89838
Tssr85345	9	57959995 to 57959998	3	+	TSS region	transcription start site region 85345
Tssr85346	9	57972512 to 57972526	14	+	TSS region	transcription start site region 85346
Tssr85347	9	57998036 to 57998058	22	+	TSS region	transcription start site region 85347
Tssr85348	9	57998068 to 57998093	25	+	TSS region	transcription start site region 85348
Gm17322	9	58005812 to 58006400	588	+	lincRNA gene	predicted gene, 17322
Cyp11a1	9	58006411 to 58027023	20612	+	protein coding gene	cytochrome P450, family 11, subfamily a, polypeptide 1