Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
repro46 | 9 | 6147917 | heritable phenotypic marker | reproductive mutant 46, JAX Reproductive Mutagenesis Program | ||
Cpgi21775 | 9 | 883 | CpG island | CpG island 21775 | ||
Psma4 | 9 | 7216 | + | protein coding gene | proteasome (prosome, macropain) subunit, alpha type 4 | |
Tssr85196 | 9 | 5 | + | TSS region | transcription start site region 85196 | |
Chrna5 | 9 | 26899 | + | protein coding gene | cholinergic receptor, nicotinic, alpha polypeptide 5 | |
Cpgi21776 | 9 | 1359 | CpG island | CpG island 21776 | ||
Tssr85197 | 9 | 14 | + | TSS region | transcription start site region 85197 | |
Chrna3 | 9 | 15216 | - | protein coding gene | cholinergic receptor, nicotinic, alpha polypeptide 3 | |
Cpgi21777 | 9 | 443 | CpG island | CpG island 21777 | ||
Cpgi21778 | 9 | 1163 | CpG island | CpG island 21778 | ||
Tssr89662 | 9 | 28 | - | TSS region | transcription start site region 89662 | |
Tssr89663 | 9 | 14 | - | TSS region | transcription start site region 89663 | |
Tssr89664 | 9 | 15 | - | TSS region | transcription start site region 89664 | |
Tssr89665 | 9 | 58 | - | TSS region | transcription start site region 89665 | |
Tssr89666 | 9 | 39 | - | TSS region | transcription start site region 89666 | |
Chrnb4 | 9 | 20625 | - | protein coding gene | cholinergic receptor, nicotinic, beta polypeptide 4 | |
Gm47877 | 9 | 8646 | + | antisense lncRNA gene | predicted gene, 47877 | |
D9Ucl1 | 9 | 202 | DNA segment | DNA segment, Chr 9, University College London 1 | ||
Tssr89667 | 9 | 17 | - | TSS region | transcription start site region 89667 | |
Cpgi21779 | 9 | 378 | CpG island | CpG island 21779 | ||
Tssr89668 | 9 | 32 | - | TSS region | transcription start site region 89668 | |
Tssr89669 | 9 | 44 | - | TSS region | transcription start site region 89669 | |
Gm47886 | 9 | 434 | + | pseudogene | predicted gene, 47886 | |
Gm47887 | 9 | 2536 | - | lincRNA gene | predicted gene, 47887 | |
Gm7395 | 9 | 1041 | - | pseudogene | predicted gene 7395 | |
D9Ertd496e | 9 | 214 | DNA segment | DNA segment, Chr 9, ERATO Doi 496, expressed | ||
D9Mit312 | 9 | 105 | DNA segment | DNA Segment, Chr 9, Massachusetts Institute of Technology 312 | ||
1700071A11Rik | 9 | 918 | unclassified gene | RIKEN cDNA 1700071A11 gene | ||
Cpgi21780 | 9 | 1736 | CpG island | CpG island 21780 | ||
Ube2q2 | 9 | 58675 | + | protein coding gene | ubiquitin-conjugating enzyme E2Q family member 2 | |
Tssr85198 | 9 | 12 | + | TSS region | transcription start site region 85198 | |
Tssr85199 | 9 | 31 | + | TSS region | transcription start site region 85199 | |
Tssr85200 | 9 | 19 | + | TSS region | transcription start site region 85200 | |
Tssr85201 | 9 | 14 | + | TSS region | transcription start site region 85201 | |
Tssr85202 | 9 | 16 | + | TSS region | transcription start site region 85202 | |
Tssr85203 | 9 | 3 | + | TSS region | transcription start site region 85203 | |
Tssr85204 | 9 | 9 | + | TSS region | transcription start site region 85204 | |
Tssr89670 | 9 | 47 | - | TSS region | transcription start site region 89670 | |
Tssr85205 | 9 | 33 | + | TSS region | transcription start site region 85205 | |
Pcho9 | 9 | 0 | QTL | plasma cholesterol 9 | ||
Arlsq1 | 9 | 0 | QTL | aortic root lesion size QTL 1 | ||
Arlsq2 | 9 | 0 | QTL | aortic root lesion size QTL 2 | ||
Tssr85206 | 9 | 6 | + | TSS region | transcription start site region 85206 | |
D9Wsu74e | 9 | 248 | DNA segment | DNA segment, Chr 9, Wayne State University 74, expressed | ||
Tssr89671 | 9 | 2 | - | TSS region | transcription start site region 89671 | |
Cpgi21781 | 9 | 1120 | CpG island | CpG island 21781 | ||
Fbxo22 | 9 | 15498 | + | protein coding gene | F-box protein 22 | |
Tssr85207 | 9 | 49 | + | TSS region | transcription start site region 85207 | |
Tssr85208 | 9 | 15 | + | TSS region | transcription start site region 85208 | |
Tssr2878 | 9 | 3 | + | TSS region | transcription start site region 2878 | |
Tssr85209 | 9 | 28 | + | TSS region | transcription start site region 85209 | |
Tssr85210 | 9 | 13 | + | TSS region | transcription start site region 85210 | |
Tssr85211 | 9 | 11 | + | TSS region | transcription start site region 85211 | |
Tssr85212 | 9 | 11 | + | TSS region | transcription start site region 85212 | |
Nrg4 | 9 | 63427 | - | protein coding gene | neuregulin 4 | |
Cpgi21782 | 9 | 159 | CpG island | CpG island 21782 | ||
Tssr2879 | 9 | 16 | - | TSS region | transcription start site region 2879 | |
Tssr89672 | 9 | 14 | - | TSS region | transcription start site region 89672 | |
Tssr89673 | 9 | 48 | - | TSS region | transcription start site region 89673 | |
Tssr89674 | 9 | 10 | - | TSS region | transcription start site region 89674 | |
Tssr89675 | 9 | 11 | - | TSS region | transcription start site region 89675 | |
Tssr89676 | 9 | 7 | - | TSS region | transcription start site region 89676 | |
Gm15625 | 9 | 1092 | + | pseudogene | predicted gene 15625 | |
Tssr85213 | 9 | 1 | + | TSS region | transcription start site region 85213 | |
Cpgi21783 | 9 | 1224 | CpG island | CpG island 21783 | ||
Tmem266 | 9 | 111426 | + | protein coding gene | transmembrane protein 266 | |
Tssr85214 | 9 | 21 | + | TSS region | transcription start site region 85214 | |
Tssr85215 | 9 | 21 | + | TSS region | transcription start site region 85215 | |
Tssr85216 | 9 | 1 | + | TSS region | transcription start site region 85216 | |
Tssr89677 | 9 | 4 | - | TSS region | transcription start site region 89677 | |
Tssr89678 | 9 | 27 | - | TSS region | transcription start site region 89678 | |
Cpgi21784 | 9 | 270 | CpG island | CpG island 21784 | ||
Tssr85217 | 9 | 12 | + | TSS region | transcription start site region 85217 | |
Tssr85218 | 9 | 19 | + | TSS region | transcription start site region 85218 | |
Tssr85219 | 9 | 14 | + | TSS region | transcription start site region 85219 | |
Tssr85220 | 9 | 24 | + | TSS region | transcription start site region 85220 | |
Etfa | 9 | 57735 | - | protein coding gene | electron transferring flavoprotein, alpha polypeptide | |
9430072B17Rik | 9 | 2985 | unclassified gene | RIKEN cDNA 9430072B17 gene | ||
Tssr89679 | 9 | 3 | - | TSS region | transcription start site region 89679 | |
Tssr89680 | 9 | 6 | - | TSS region | transcription start site region 89680 | |
Cpgi21785 | 9 | 1036 | CpG island | CpG island 21785 | ||
Tssr89681 | 9 | 74 | - | TSS region | transcription start site region 89681 | |
Gm5917 | 9 | 720 | + | pseudogene | predicted gene 5917 | |
Isl2 | 9 | 7508 | + | protein coding gene | insulin related protein 2 (islet 2) | |
Gm17226 | 9 | 1339 | - | antisense lncRNA gene | predicted gene 17226 | |
Cpgi21786 | 9 | 372 | CpG island | CpG island 21786 | ||
Cpgi21787 | 9 | 613 | CpG island | CpG island 21787 | ||
Tssr89682 | 9 | 32 | - | TSS region | transcription start site region 89682 | |
Tssr85221 | 9 | 19 | + | TSS region | transcription start site region 85221 | |
Cpgi21788 | 9 | 1539 | CpG island | CpG island 21788 | ||
Cpgi21789 | 9 | 760 | CpG island | CpG island 21789 | ||
Cpgi21790 | 9 | 1787 | CpG island | CpG island 21790 | ||
Scaper | 9 | 388240 | - | protein coding gene | S phase cyclin A-associated protein in the ER | |
Gm23407 | 9 | 90 | - | snRNA gene | predicted gene, 23407 | |
Tssr89683 | 9 | 2 | - | TSS region | transcription start site region 89683 | |
Gm18102 | 9 | 619 | + | pseudogene | predicted gene, 18102 | |
Gm39342 | 9 | 5378 | - | lncRNA gene | predicted gene, 39342 | |
8430427G23Rik | 9 | 618 | unclassified gene | RIKEN cDNA 8430427G23 gene | ||
Gm46114 | 9 | 1532 | + | pseudogene | predicted gene, 46114 | |
1110019B24Rik | 9 | 1049 | unclassified gene | RIKEN cDNA 1110019B24 gene | ||
Cpgi21791 | 9 | 749 | CpG island | CpG island 21791 | ||
Tssr89684 | 9 | 50 | - | TSS region | transcription start site region 89684 | |
Tssr89685 | 9 | 28 | - | TSS region | transcription start site region 89685 | |
Tssr85222 | 9 | 42 | + | TSS region | transcription start site region 85222 | |
Tssr85223 | 9 | 31 | + | TSS region | transcription start site region 85223 | |
Tssr85224 | 9 | 9 | + | TSS region | transcription start site region 85224 | |
Gm7435 | 9 | 2466 | + | pseudogene | predicted gene 7435 | |
4930563M21Rik | 9 | 47961 | - | protein coding gene | RIKEN cDNA 4930563M21 gene | |
Gm7439 | 9 | 834 | + | pseudogene | predicted gene 7439 | |
Tssr89686 | 9 | 19 | - | TSS region | transcription start site region 89686 | |
Tssr85225 | 9 | 24 | + | TSS region | transcription start site region 85225 | |
Tssr85226 | 9 | 18 | + | TSS region | transcription start site region 85226 | |
Gm7444 | 9 | 2427 | + | pseudogene | predicted gene 7444 | |
Cpgi21792 | 9 | 833 | CpG island | CpG island 21792 | ||
Rcn2 | 9 | 17238 | + | protein coding gene | reticulocalbin 2 | |
Tssr85227 | 9 | 18 | + | TSS region | transcription start site region 85227 | |
Tssr85228 | 9 | 22 | + | TSS region | transcription start site region 85228 | |
Tssr85229 | 9 | 3 | + | TSS region | transcription start site region 85229 | |
Tssr85230 | 9 | 40 | + | TSS region | transcription start site region 85230 | |
Gm31261 | 9 | 3116 | - | lncRNA gene | predicted gene, 31261 | |
Tssr85231 | 9 | 12 | + | TSS region | transcription start site region 85231 | |
Pstpip1 | 9 | 38926 | + | protein coding gene | proline-serine-threonine phosphatase-interacting protein 1 | |
Tssr85232 | 9 | 21 | + | TSS region | transcription start site region 85232 | |
Tssr85233 | 9 | 19 | + | TSS region | transcription start site region 85233 | |
Tssr85234 | 9 | 45 | + | TSS region | transcription start site region 85234 | |
Tssr85235 | 9 | 14 | + | TSS region | transcription start site region 85235 | |
Tssr2880 | 9 | 5 | + | TSS region | transcription start site region 2880 | |
Tssr85236 | 9 | 15 | + | TSS region | transcription start site region 85236 | |
Tssr85237 | 9 | 28 | + | TSS region | transcription start site region 85237 | |
Tssr85238 | 9 | 16 | + | TSS region | transcription start site region 85238 | |
Tssr85239 | 9 | 26 | + | TSS region | transcription start site region 85239 | |
Tssr85240 | 9 | 31 | + | TSS region | transcription start site region 85240 | |
Tssr85241 | 9 | 11 | + | TSS region | transcription start site region 85241 | |
Tssr85242 | 9 | 13 | + | TSS region | transcription start site region 85242 | |
Tssr85243 | 9 | 36 | + | TSS region | transcription start site region 85243 | |
Tssr85244 | 9 | 11 | + | TSS region | transcription start site region 85244 | |
Tssr85245 | 9 | 4 | + | TSS region | transcription start site region 85245 | |
Tssr85246 | 9 | 12 | + | TSS region | transcription start site region 85246 | |
Tssr85247 | 9 | 11 | + | TSS region | transcription start site region 85247 | |
Tssr85248 | 9 | 16 | + | TSS region | transcription start site region 85248 | |
Tspan3 | 9 | 25186 | - | protein coding gene | tetraspanin 3 | |
Tssr89687 | 9 | 16 | - | TSS region | transcription start site region 89687 | |
Tssr89688 | 9 | 41 | - | TSS region | transcription start site region 89688 | |
Tssr89689 | 9 | 10 | - | TSS region | transcription start site region 89689 | |
Tssr89690 | 9 | 19 | - | TSS region | transcription start site region 89690 | |
Tssr89691 | 9 | 57 | - | TSS region | transcription start site region 89691 | |
Tssr89692 | 9 | 1 | - | TSS region | transcription start site region 89692 | |
Tssr89693 | 9 | 8 | - | TSS region | transcription start site region 89693 | |
Tssr2881 | 9 | 1 | + | TSS region | transcription start site region 2881 | |
Tssr89694 | 9 | 2 | - | TSS region | transcription start site region 89694 | |
Tssr2882 | 9 | 4 | + | TSS region | transcription start site region 2882 | |
Cpgi21793 | 9 | 915 | CpG island | CpG island 21793 | ||
Tssr89695 | 9 | 28 | - | TSS region | transcription start site region 89695 | |
Tssr89696 | 9 | 47 | - | TSS region | transcription start site region 89696 | |
Tssr89697 | 9 | 24 | - | TSS region | transcription start site region 89697 | |
Tssr2883 | 9 | 5 | - | TSS region | transcription start site region 2883 | |
Tssr85249 | 9 | 10 | + | TSS region | transcription start site region 85249 | |
Peak1 | 9 | 216941 | - | protein coding gene | pseudopodium-enriched atypical kinase 1 | |
Tssr89698 | 9 | 4 | - | TSS region | transcription start site region 89698 | |
Tssr89699 | 9 | 11 | - | TSS region | transcription start site region 89699 | |
Cpgi21794 | 9 | 448 | CpG island | CpG island 21794 | ||
Gm24270 | 9 | 56 | - | miRNA gene | predicted gene, 24270 | |
Gm29322 | 9 | 1466 | - | sense intronic lncRNA gene | predicted gene 29322 | |
Tssr89700 | 9 | 12 | - | TSS region | transcription start site region 89700 | |
Tssr89701 | 9 | 49 | - | TSS region | transcription start site region 89701 | |
Tssr85250 | 9 | 6 | + | TSS region | transcription start site region 85250 | |
Tssr85251 | 9 | 38 | + | TSS region | transcription start site region 85251 | |
Peak1os | 9 | 9890 | + | antisense lncRNA gene | pseudopodium-enriched atypical kinase 1, opposite strand | |
Tssr89702 | 9 | 28 | - | TSS region | transcription start site region 89702 | |
Gm37842 | 9 | 1568 | + | unclassified gene | predicted gene, 37842 | |
Tssr89703 | 9 | 6 | - | TSS region | transcription start site region 89703 | |
D9Mit142 | 9 | 181 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 142 | ||
Tssr89704 | 9 | 5 | - | TSS region | transcription start site region 89704 | |
Tssr89705 | 9 | 22 | - | TSS region | transcription start site region 89705 | |
Tssr89706 | 9 | 3 | - | TSS region | transcription start site region 89706 | |
Gm36940 | 9 | 2035 | - | unclassified gene | predicted gene, 36940 | |
Cpgi21795 | 9 | 1494 | CpG island | CpG island 21795 | ||
Tssr89707 | 9 | 29 | - | TSS region | transcription start site region 89707 | |
Tssr89708 | 9 | 20 | - | TSS region | transcription start site region 89708 | |
Tssr89709 | 9 | 11 | - | TSS region | transcription start site region 89709 | |
Tssr85252 | 9 | 12 | + | TSS region | transcription start site region 85252 | |
Tssr85253 | 9 | 10 | + | TSS region | transcription start site region 85253 | |
Tssr85254 | 9 | 57 | + | TSS region | transcription start site region 85254 | |
Hmg20a | 9 | 78308 | + | protein coding gene | high mobility group 20A | |
Tssr85255 | 9 | 12 | + | TSS region | transcription start site region 85255 | |
Tssr85256 | 9 | 42 | + | TSS region | transcription start site region 85256 | |
Tssr89710 | 9 | 11 | - | TSS region | transcription start site region 89710 | |
Tssr85257 | 9 | 7 | + | TSS region | transcription start site region 85257 | |
Tssr89711 | 9 | 35 | - | TSS region | transcription start site region 89711 | |
Tssr85258 | 9 | 4 | + | TSS region | transcription start site region 85258 | |
Tssr85259 | 9 | 3 | + | TSS region | transcription start site region 85259 | |
Tssr85260 | 9 | 9 | + | TSS region | transcription start site region 85260 | |
Gm2296 | 9 | 987 | + | pseudogene | predicted gene 2296 | |
Tssr85261 | 9 | 24 | + | TSS region | transcription start site region 85261 | |
5830432F11Rik | 9 | 1051 | unclassified gene | RIKEN cDNA 5830432F11 gene | ||
Tssr85262 | 9 | 18 | + | TSS region | transcription start site region 85262 | |
Spcq2 | 9 | 0 | QTL | sperm count QTL 2 | ||
Gm47175 | 9 | 1836 | - | unclassified gene | predicted gene, 47175 | |
Tssr89712 | 9 | 7 | - | TSS region | transcription start site region 89712 | |
Gm47176 | 9 | 327 | + | lincRNA gene | predicted gene, 47176 |