MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:53461728-53611747

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Atm	9	53439149 to 53536740	97591	-	protein coding gene	ataxia telangiectasia mutated
Cpgi21755	9	53536399 to 53537824	1425		CpG island	CpG island 21755
Tssr89600	9	53536619 to 53536693	74	-	TSS region	transcription start site region 89600
Tssr89601	9	53536695 to 53536711	16	-	TSS region	transcription start site region 89601
Tssr89602	9	53536728 to 53536747	19	-	TSS region	transcription start site region 89602
Tssr89603	9	53536757 to 53536769	12	-	TSS region	transcription start site region 89603
Tssr85139	9	53537021 to 53537074	53	+	TSS region	transcription start site region 85139
Npat	9	53537047 to 53574342	37295	+	protein coding gene	nuclear protein in the AT region
Tssr85140	9	53537083 to 53537094	11	+	TSS region	transcription start site region 85140
1110050P16Rik	9	53567752 to 53569120	1368		unclassified gene	RIKEN cDNA 1110050P16 gene
Gm9963	9	53574955 to 53577328	2373		unclassified gene	predicted gene 9963
Acat1	9	53580522 to 53610350	29828	-	protein coding gene	acetyl-Coenzyme A acetyltransferase 1
Tssr89604	9	53592024 to 53592036	12	-	TSS region	transcription start site region 89604
Tssr89605	9	53592080 to 53592097	17	-	TSS region	transcription start site region 89605
Tssr89606	9	53594720 to 53594740	20	-	TSS region	transcription start site region 89606
Cpgi21756	9	53609961 to 53610638	677		CpG island	CpG island 21756
Tssr89607	9	53610285 to 53610328	43	-	TSS region	transcription start site region 89607
Tssr89608	9	53610329 to 53610367	38	-	TSS region	transcription start site region 89608