MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:49787652-50037799

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ncam1	9	49502136 to 49798925	296789	-	protein coding gene	neural cell adhesion molecule 1
Tssr89466	9	49794457 to 49794461	4	-	TSS region	transcription start site region 89466
Cpgi21723	9	49796656 to 49799162	2506		CpG island	CpG island 21723
Tssr89467	9	49798821 to 49798855	34	-	TSS region	transcription start site region 89467
Tssr89468	9	49798905 to 49798931	26	-	TSS region	transcription start site region 89468
Tssr2865	9	49798947 to 49798958	11	-	TSS region	transcription start site region 2865
Gm25633	9	49825869 to 49825975	106	-	snRNA gene	predicted gene, 25633
D9Mit131.1	9	49912510 to 49912656	146		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 131.1
D9Mit131	9	49912652 to 49912799	147		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 131
D9Mit131.2	9	49912746 to 49912855	109		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 131.2
Tssr85018	9	49954868 to 49954891	23	+	TSS region	transcription start site region 85018
Gm47543	9	49954878 to 49956554	1676	+	lincRNA gene	predicted gene, 47543
Tssr85019	9	49954893 to 49954900	7	+	TSS region	transcription start site region 85019
Tssr85020	9	49954902 to 49954911	9	+	TSS region	transcription start site region 85020
D9Mit162.1	9	49978195 to 49978395	200		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 162.1
Ptnu3	9	49978402 to 49978536	134		QTL	proteinuria 3
D9Mit162	9	49978402 to 49978536	134		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 162