Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:20647690-20766333

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi21395	9	20651754 to 20652658	904		CpG island	CpG island 21395
Tssr83920	9	20652090 to 20652104	14	+	TSS region	transcription start site region 83920
Tssr83921	9	20652107 to 20652138	31	+	TSS region	transcription start site region 83921
Pin1	9	20652130 to 20666584	14454	+	protein coding gene	protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1
Tssr83922	9	20653979 to 20653997	18	+	TSS region	transcription start site region 83922
Olfm2	9	20667691 to 20746307	78616	-	protein coding gene	olfactomedin 2
Tssr88321	9	20667853 to 20667919	66	-	TSS region	transcription start site region 88321
Tssr88322	9	20667924 to 20667996	72	-	TSS region	transcription start site region 88322
Tssr88323	9	20667999 to 20668014	15	-	TSS region	transcription start site region 88323
Tssr88324	9	20668044 to 20668096	52	-	TSS region	transcription start site region 88324
Cpgi21396	9	20668140 to 20668607	467		CpG island	CpG island 21396
Cpgi21397	9	20672051 to 20672287	236		CpG island	CpG island 21397
9430006E15Rik	9	20687817 to 20688833	1016		unclassified gene	RIKEN cDNA 9430006E15 gene
Cpgi21398	9	20694852 to 20695152	300		CpG island	CpG island 21398
Cpgi21399	9	20726275 to 20728422	2147		CpG island	CpG island 21399
Tssr88325	9	20726965 to 20726984	19	-	TSS region	transcription start site region 88325
Tssr88326	9	20726996 to 20727012	16	-	TSS region	transcription start site region 88326
Gm39299	9	20738791 to 20746153	7362	+	lncRNA gene	predicted gene, 39299
Cpgi21400	9	20745702 to 20746594	892		CpG island	CpG island 21400
Tssr88327	9	20746233 to 20746251	18	-	TSS region	transcription start site region 88327
Tssr88328	9	20746262 to 20746280	18	-	TSS region	transcription start site region 88328
Tssr88329	9	20746318 to 20746339	21	-	TSS region	transcription start site region 88329
Tssr88330	9	20746347 to 20746368	21	-	TSS region	transcription start site region 88330
Tssr88331	9	20746384 to 20746401	17	-	TSS region	transcription start site region 88331
Gm35860	9	20749265 to 20759126	9861	-	lncRNA gene	predicted gene, 35860