Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:101917128-102359693

31 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
9630041A04Rik	9	101861841 to 101943228	81387	+	protein coding gene	RIKEN cDNA 9630041A04 gene
Ephb1	9	101922128 to 102354693	432565	-	protein coding gene	Eph receptor B1
D9Mgc4	9	101924870 to 101925178	308		DNA segment	DNA segment, Chr 9, MRC UK Mouse Genome Centre 4
D9Mgc5	9	101939585 to 101939845	260		DNA segment	DNA segment, Chr 9, MRC UK Mouse Genome Centre 5
Tssr86718	9	101989193 to 101989201	8	+	TSS region	transcription start site region 86718
Gm31326	9	101989260 to 101990307	1047	+	lncRNA gene	predicted gene, 31326
Tssr86719	9	101991750 to 101991776	26	+	TSS region	transcription start site region 86719
Tssr86720	9	102051716 to 102051717	1	+	TSS region	transcription start site region 86720
Gm37562	9	102052230 to 102056557	4327	-	unclassified gene	predicted gene, 37562
D9Mgc6	9	102096717 to 102096986	269		DNA segment	DNA segment, Chr 9, MRC UK Mouse Genome Centre 6
D9Mgc7	9	102104203 to 102104351	148		DNA segment	DNA segment, Chr 9, MRC UK Mouse Genome Centre 7
n-R5s88	9	102127888 to 102128005	117	+	rRNA gene	nuclear encoded rRNA 5S 88
D9Mgc8	9	102130303 to 102130471	168		DNA segment	DNA segment, Chr 9, MRC UK Mouse Genome Centre 8
D9Mit358	9	102138467 to 102138583	116		DNA segment	DNA Segment, Chr 9, Massachusetts Institute of Technology 358
Gm29388	9	102151242 to 102153717	2475	-	sense intronic lncRNA gene	predicted gene 29388
Tssr86721	9	102172731 to 102172764	33	+	TSS region	transcription start site region 86721
Gm37945	9	102172738 to 102177104	4366	+	unclassified gene	predicted gene, 37945
Gm31233	9	102211762 to 102236746	24984	+	lncRNA gene	predicted gene, 31233
D9Mgc11	9	102264816 to 102264972	156		DNA segment	DNA segment, Chr 9, MRC UK Mouse Genome Centre 11
D9Mgc10	9	102264836 to 102264949	113		DNA segment	DNA segment, Chr 9, MRC UK Mouse Genome Centre 10
D9Mgc9	9	102265299 to 102265421	122		DNA segment	DNA segment, Chr 9, MRC UK Mouse Genome Centre 9
Gm37260	9	102273736 to 102274986	1250	+	unclassified gene	predicted gene, 37260
Tssr91122	9	102304512 to 102304527	15	-	TSS region	transcription start site region 91122
Mir7243	9	102304924 to 102304975	51	-	miRNA gene	microRNA 7243
D9Mgc32	9	102340681 to 102340847	166		DNA segment	DNA segment, Chr 9, MRC UK Mouse Genome Centre 32
Gm26846	9	102345903 to 102354694	8791	+	lincRNA gene	predicted gene, 26846
Cpgi22219	9	102352483 to 102354987	2504		CpG island	CpG island 22219
Tssr91123	9	102354596 to 102354607	11	-	TSS region	transcription start site region 91123
Tssr91124	9	102354626 to 102354633	7	-	TSS region	transcription start site region 91124
Tssr91125	9	102354642 to 102354672	30	-	TSS region	transcription start site region 91125
Tssr91126	9	102354685 to 102354699	14	-	TSS region	transcription start site region 91126