Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:94778417-94914895

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cx3cl1 8 94772180 to 94782427 10247 + protein coding gene chemokine (C-X3-C motif) ligand 1
Tssr78915 8 94779822 to 94779834 12 + TSS region transcription start site region 78915
Tssr78916 8 94780457 to 94780470 13 + TSS region transcription start site region 78916
Tssr78917 8 94780478 to 94780491 13 + TSS region transcription start site region 78917
Tssr78918 8 94780826 to 94780840 14 + TSS region transcription start site region 78918
Tssr78919 8 94781170 to 94781177 7 + TSS region transcription start site region 78919
1700121C10Rik 8 94794168 to 94802435 8267 unclassified gene RIKEN cDNA 1700121C10 gene
Tssr82512 8 94802463 to 94802464 1 - TSS region transcription start site region 82512
Tssr2655 8 94802470 to 94802473 3 - TSS region transcription start site region 2655
Tssr78920 8 94810446 to 94810461 15 + TSS region transcription start site region 78920
Ccl17 8 94810453 to 94812036 1583 + protein coding gene chemokine (C-C motif) ligand 17
Ciapin1 8 94819818 to 94838372 18554 - protein coding gene cytokine induced apoptosis inhibitor 1
Gm7418 8 94835717 to 94836517 800 + pseudogene predicted pseudogene 7418
Cpgi20855 8 94837636 to 94839012 1376 CpG island CpG island 20855
Tssr82513 8 94838207 to 94838246 39 - TSS region transcription start site region 82513
Tssr82514 8 94838255 to 94838336 81 - TSS region transcription start site region 82514
Tssr78921 8 94838388 to 94838425 37 + TSS region transcription start site region 78921
Coq9 8 94838417 to 94854895 16478 + protein coding gene coenzyme Q9
Tssr82515 8 94838810 to 94838845 35 - TSS region transcription start site region 82515
Tssr82516 8 94838854 to 94838864 10 - TSS region transcription start site region 82516
Cpgi20856 8 94857318 to 94858139 821 CpG island CpG island 20856
Polr2c 8 94857450 to 94864242 6792 + protein coding gene polymerase (RNA) II (DNA directed) polypeptide C
Tssr78922 8 94857474 to 94857494 20 + TSS region transcription start site region 78922
Tssr2656 8 94857528 to 94857558 30 + TSS region transcription start site region 2656
Dok4 8 94863828 to 94876312 12484 - protein coding gene docking protein 4
Cpgi20857 8 94875595 to 94876720 1125 CpG island CpG island 20857
Tssr82517 8 94876250 to 94876263 13 - TSS region transcription start site region 82517
Tssr82518 8 94876269 to 94876321 52 - TSS region transcription start site region 82518
Tssr82519 8 94876324 to 94876335 11 - TSS region transcription start site region 82519
D8Mit109 8 94879159 to 94879291 132 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 109
Cpgi20858 8 94889165 to 94889373 208 CpG island CpG island 20858
D8Mit32 8 94894018 to 94894184 166 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 32
Ccdc102a 8 94902869 to 94918098 15229 - protein coding gene coiled-coil domain containing 102A
Cpgi20859 8 94912905 to 94914043 1138 CpG island CpG island 20859