Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:72148494-72278636

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tpm4 8 72135292 to 72153129 17837 + protein coding gene tropomyosin 4
Gm16091 8 72147601 to 72160855 13254 - unclassified non-coding RNA gene predicted gene 16091
Tssr77946 8 72152562 to 72152584 22 + TSS region transcription start site region 77946
Tssr77947 8 72152596 to 72152610 14 + TSS region transcription start site region 77947
Tssr77948 8 72152624 to 72152636 12 + TSS region transcription start site region 77948
Tssr81771 8 72160545 to 72160552 7 - TSS region transcription start site region 81771
Cpgi20581 8 72160560 to 72161739 1179 CpG island CpG island 20581
Tssr81772 8 72160805 to 72160869 64 - TSS region transcription start site region 81772
Tssr77949 8 72161101 to 72161147 46 + TSS region transcription start site region 77949
Rab8a 8 72161200 to 72181366 20166 + protein coding gene RAB8A, member RAS oncogene family
Tssr77950 8 72161334 to 72161369 35 + TSS region transcription start site region 77950
Tssr81773 8 72162949 to 72162960 11 - TSS region transcription start site region 81773
Tssr77951 8 72169286 to 72169291 5 + TSS region transcription start site region 77951
Tssr77952 8 72183986 to 72183990 4 + TSS region transcription start site region 77952
Tssr77953 8 72189613 to 72189664 51 + TSS region transcription start site region 77953
Hsh2d 8 72189668 to 72200958 11290 + protein coding gene hematopoietic SH2 domain containing
Cib3 8 72204335 to 72212837 8502 - protein coding gene calcium and integrin binding family member 3
Gm11034 8 72213494 to 72213636 142 - protein coding gene predicted gene 11034
Tssr77954 8 72219020 to 72219036 16 + TSS region transcription start site region 77954
Cpgi20582 8 72219558 to 72220173 615 CpG island CpG island 20582
Tssr77955 8 72219720 to 72219723 3 + TSS region transcription start site region 77955
Tssr77956 8 72219726 to 72219785 59 + TSS region transcription start site region 77956
Fam32a 8 72219730 to 72223775 4045 + protein coding gene family with sequence similarity 32, member A
Tssr77957 8 72219797 to 72219808 11 + TSS region transcription start site region 77957
Cpgi20583 8 72239514 to 72240704 1190 CpG island CpG island 20583
Tssr77958 8 72240034 to 72240045 11 + TSS region transcription start site region 77958
Ap1m1 8 72240052 to 72257385 17333 + protein coding gene adaptor-related protein complex AP-1, mu subunit 1
Tssr77959 8 72240052 to 72240181 129 + TSS region transcription start site region 77959
Tssr77960 8 72240315 to 72240346 31 + TSS region transcription start site region 77960
Tssr77961 8 72240348 to 72240353 5 + TSS region transcription start site region 77961
Tssr77962 8 72247414 to 72247432 18 + TSS region transcription start site region 77962
Tssr77963 8 72255761 to 72255767 6 + TSS region transcription start site region 77963
Tssr81774 8 72268435 to 72268477 42 - TSS region transcription start site region 81774
Tssr77964 8 72268605 to 72268618 13 + TSS region transcription start site region 77964
Tssr77965 8 72268703 to 72268712 9 + TSS region transcription start site region 77965