Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:25675324-25804474

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nsd3 8 25601601 to 25719667 118066 + protein coding gene nuclear receptor binding SET domain protein 3
Tssr76703 8 25677002 to 25677007 5 + TSS region transcription start site region 76703
Gm23094 8 25678950 to 25679271 321 + unclassified non-coding RNA gene predicted gene, 23094
Gm45343 8 25687369 to 25688196 827 + unclassified gene predicted gene 45343
Tssr76704 8 25687684 to 25687705 21 + TSS region transcription start site region 76704
Gm45342 8 25692146 to 25693508 1362 + unclassified gene predicted gene 45342
Tssr76705 8 25716572 to 25716584 12 + TSS region transcription start site region 76705
Cpgi20190 8 25719899 to 25720697 798 CpG island CpG island 20190
Plpp5 8 25720037 to 25724887 4850 + protein coding gene phospholipid phosphatase 5
Tssr76706 8 25720042 to 25720053 11 + TSS region transcription start site region 76706
Tssr76707 8 25720054 to 25720099 45 + TSS region transcription start site region 76707
Tssr76708 8 25720135 to 25720148 13 + TSS region transcription start site region 76708
Tssr76709 8 25720259 to 25720304 45 + TSS region transcription start site region 76709
Tssr76710 8 25720459 to 25720474 15 + TSS region transcription start site region 76710
Ddhd2 8 25725324 to 25754407 29083 - protein coding gene DDHD domain containing 2
D8Ertd317e 8 25729970 to 25730212 242 DNA segment DNA segment, Chr 8, ERATO Doi 317, expressed
6430710M23Rik 8 25744390 to 25745580 1190 - unclassified gene RIKEN cDNA 6430710M23 gene
Cpgi20191 8 25753744 to 25754898 1154 CpG island CpG island 20191
Tssr80725 8 25754214 to 25754250 36 - TSS region transcription start site region 80725
Tssr2526 8 25754252 to 25754275 23 - TSS region transcription start site region 2526
Tssr80726 8 25754352 to 25754424 72 - TSS region transcription start site region 80726
Tssr76711 8 25754462 to 25754485 23 + TSS region transcription start site region 76711
Gm17484 8 25754480 to 25769704 15224 + lincRNA gene predicted gene, 17484
Tssr76712 8 25754492 to 25754514 22 + TSS region transcription start site region 76712
Bag4 8 25764538 to 25785209 20671 - protein coding gene BCL2-associated athanogene 4
Tssr80727 8 25769583 to 25769593 10 - TSS region transcription start site region 80727
Gm19075 8 25775836 to 25776513 677 - pseudogene predicted gene, 19075
Cpgi20192 8 25784461 to 25786114 1653 CpG island CpG island 20192
Tssr80728 8 25785154 to 25785215 61 - TSS region transcription start site region 80728
Tssr80729 8 25785223 to 25785230 7 - TSS region transcription start site region 80729
Tssr76713 8 25785289 to 25785319 30 + TSS region transcription start site region 76713
Lsm1 8 25785536 to 25803975 18439 + protein coding gene LSM1 homolog, mRNA degradation associated
Tssr76714 8 25785538 to 25785587 49 + TSS region transcription start site region 76714
Tssr76715 8 25785597 to 25785603 6 + TSS region transcription start site region 76715
Gm46037 8 25788823 to 25789353 530 - pseudogene predicted gene, 46037
Tssr80730 8 25789315 to 25789324 9 - TSS region transcription start site region 80730
Tssr80731 8 25797072 to 25797077 5 - TSS region transcription start site region 80731