Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:25276668-25576671

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39145 8 25271046 to 25279558 8512 + lncRNA gene predicted gene, 39145
5430421F17Rik 8 25302650 to 25306270 3620 - lincRNA gene RIKEN cDNA 5430421F17 gene
Tssr80707 8 25306203 to 25306217 14 - TSS region transcription start site region 80707
Tssr80708 8 25306221 to 25306239 18 - TSS region transcription start site region 80708
Gm39146 8 25353360 to 25389823 36463 - lncRNA gene predicted gene, 39146
Tssr2525 8 25363940 to 25363947 7 - TSS region transcription start site region 2525
Gm39147 8 25399076 to 25427396 28320 + pseudogene predicted gene, 39147
Gm30978 8 25415119 to 25429224 14105 - lincRNA gene predicted gene, 30978
Tssr76678 8 25426668 to 25426671 3 + TSS region transcription start site region 76678
Gm45237 8 25440618 to 25448762 8144 + lincRNA gene predicted gene 45237
Cpgi20184 8 25440781 to 25441040 259 CpG island CpG island 20184
Gm45238 8 25443668 to 25454107 10439 - lincRNA gene predicted gene 45238
Gm10689 8 25454273 to 25454704 431 + pseudogene predicted gene 10689
Gm31045 8 25463682 to 25483800 20118 - lincRNA gene predicted gene, 31045
Cpgi20185 8 25465855 to 25466217 362 CpG island CpG island 20185
Tssr80709 8 25499584 to 25499585 1 - TSS region transcription start site region 80709
Fgfr1 8 25513654 to 25575718 62064 + protein coding gene fibroblast growth factor receptor 1
Cpgi20186 8 25518477 to 25520025 1548 CpG island CpG island 20186
Tssr76679 8 25518630 to 25518643 13 + TSS region transcription start site region 76679
Tssr76680 8 25518757 to 25518771 14 + TSS region transcription start site region 76680
Tssr76681 8 25518783 to 25518801 18 + TSS region transcription start site region 76681
Gm31288 8 25520786 to 25543249 22463 - lncRNA gene predicted gene, 31288
Tssr76682 8 25532125 to 25532136 11 + TSS region transcription start site region 76682
Tssr80710 8 25544992 to 25545007 15 - TSS region transcription start site region 80710
Tssr80711 8 25548062 to 25548072 10 - TSS region transcription start site region 80711
Tssr80712 8 25548076 to 25548088 12 - TSS region transcription start site region 80712
Gm16159 8 25548673 to 25556083 7410 - antisense lncRNA gene predicted gene 16159
Tssr76683 8 25555059 to 25555070 11 + TSS region transcription start site region 76683
Cpgi20187 8 25555533 to 25556044 511 CpG island CpG island 20187
Tssr80713 8 25556134 to 25556152 18 - TSS region transcription start site region 80713
Tssr80714 8 25556161 to 25556184 23 - TSS region transcription start site region 80714
Tssr76684 8 25564413 to 25564437 24 + TSS region transcription start site region 76684
Tssr76685 8 25574062 to 25574074 12 + TSS region transcription start site region 76685