Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:123113307-123203325

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi21240 8 123116839 to 123118246 1407 CpG island CpG island 21240
Tssr79914 8 123117354 to 123117379 25 + TSS region transcription start site region 79914
Cpne7 8 123117374 to 123135182 17808 + protein coding gene copine VII
Tssr79915 8 123117387 to 123117404 17 + TSS region transcription start site region 79915
Tssr79916 8 123117447 to 123117476 29 + TSS region transcription start site region 79916
Cpgi21241 8 123126269 to 123126673 404 CpG island CpG island 21241
Mir7080 8 123130106 to 123130172 66 + miRNA gene microRNA 7080
Sult5a1 8 123142843 to 123158913 16070 - protein coding gene sulfotransferase family 5A, member 1
Tssr83336 8 123158229 to 123158264 35 - TSS region transcription start site region 83336
Tssr83337 8 123158268 to 123158295 27 - TSS region transcription start site region 83337
Tssr83338 8 123158307 to 123158325 18 - TSS region transcription start site region 83338
Gm42052 8 123169029 to 123171047 2018 + protein coding gene predicted gene, 42052
Gm4316 8 123172557 to 123178767 6210 + lincRNA gene predicted gene 4316
Tssr79917 8 123186108 to 123186117 9 + TSS region transcription start site region 79917
Tssr79918 8 123186163 to 123186174 11 + TSS region transcription start site region 79918
Tssr79919 8 123186237 to 123186262 25 + TSS region transcription start site region 79919
Dpep1 8 123186242 to 123201812 15570 + protein coding gene dipeptidase 1
Tssr79920 8 123186271 to 123186282 11 + TSS region transcription start site region 79920
Tssr79921 8 123186317 to 123186397 80 + TSS region transcription start site region 79921
Tssr79922 8 123186405 to 123186416 11 + TSS region transcription start site region 79922
Tssr2723 8 123193575 to 123193579 4 + TSS region transcription start site region 2723
Tssr79923 8 123193943 to 123193989 46 + TSS region transcription start site region 79923
Tssr79924 8 123194000 to 123194012 12 + TSS region transcription start site region 79924
Tssr79925 8 123194014 to 123194025 11 + TSS region transcription start site region 79925