Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:122451698-122581329

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Snai3 8 122454208 to 122460733 6525 - protein coding gene snail family zinc finger 3
Cpgi21220 8 122460258 to 122461395 1137 CpG island CpG island 21220
Tssr83272 8 122460666 to 122460695 29 - TSS region transcription start site region 83272
Rnf166 8 122466147 to 122476064 9917 - protein coding gene ring finger protein 166
Tssr79871 8 122470196 to 122470212 16 + TSS region transcription start site region 79871
Tssr79872 8 122470227 to 122470232 5 + TSS region transcription start site region 79872
Gm24366 8 122471627 to 122471712 85 - miRNA gene predicted gene, 24366
Tssr83273 8 122474776 to 122474781 5 - TSS region transcription start site region 83273
Cpgi21221 8 122474984 to 122476687 1703 CpG island CpG island 21221
Tssr83274 8 122475709 to 122475729 20 - TSS region transcription start site region 83274
Tssr83275 8 122476003 to 122476026 23 - TSS region transcription start site region 83275
Tssr83276 8 122476036 to 122476088 52 - TSS region transcription start site region 83276
Ctu2 8 122476094 to 122483094 7000 + protein coding gene cytosolic thiouridylase subunit 2
Tssr83277 8 122476096 to 122476115 19 - TSS region transcription start site region 83277
Tssr79873 8 122476152 to 122476194 42 + TSS region transcription start site region 79873
Tssr79874 8 122476196 to 122476223 27 + TSS region transcription start site region 79874
Piezo1 8 122481698 to 122551329 69631 - protein coding gene piezo-type mechanosensitive ion channel component 1
Cpgi21222 8 122488117 to 122488511 394 CpG island CpG island 21222
Tssr83278 8 122491935 to 122491941 6 - TSS region transcription start site region 83278
Gm26497 8 122520568 to 122520674 106 - snRNA gene predicted gene, 26497
Tssr79875 8 122523574 to 122523627 53 + TSS region transcription start site region 79875
Tssr79876 8 122523649 to 122523658 9 + TSS region transcription start site region 79876
Tssr79877 8 122546482 to 122546501 19 + TSS region transcription start site region 79877
Tssr79878 8 122549338 to 122549357 19 + TSS region transcription start site region 79878
Cpgi21223 8 122550094 to 122551912 1818 CpG island CpG island 21223
Tssr79879 8 122550421 to 122550432 11 + TSS region transcription start site region 79879
Tssr79880 8 122550651 to 122550698 47 + TSS region transcription start site region 79880
Tssr83279 8 122551316 to 122551333 17 - TSS region transcription start site region 83279
Gm34847 8 122556348 to 122559608 3260 + lncRNA gene predicted gene, 34847
Tssr83280 8 122556734 to 122556755 21 - TSS region transcription start site region 83280
Tssr79881 8 122557846 to 122557895 49 + TSS region transcription start site region 79881
Tssr79882 8 122564573 to 122564613 40 + TSS region transcription start site region 79882
Tssr79883 8 122564783 to 122564800 17 + TSS region transcription start site region 79883
Tssr79884 8 122564918 to 122564956 38 + TSS region transcription start site region 79884
Cpgi21224 8 122567233 to 122568486 1253 CpG island CpG island 21224
Tssr83281 8 122567706 to 122567715 9 - TSS region transcription start site region 83281
Tssr83282 8 122567771 to 122567793 22 - TSS region transcription start site region 83282
Tssr2717 8 122567976 to 122567983 7 + TSS region transcription start site region 2717
Tssr79885 8 122568001 to 122568020 19 + TSS region transcription start site region 79885
Cdt1 8 122568015 to 122573130 5115 + protein coding gene chromatin licensing and DNA replication factor 1
Tssr79886 8 122568021 to 122568060 39 + TSS region transcription start site region 79886
Tssr83283 8 122568348 to 122568367 19 - TSS region transcription start site region 83283
Tssr79887 8 122569173 to 122569195 22 + TSS region transcription start site region 79887
Tssr79888 8 122570230 to 122570250 20 + TSS region transcription start site region 79888
Tssr79889 8 122574635 to 122574638 3 + TSS region transcription start site region 79889
Aprt 8 122574637 to 122576907 2270 - protein coding gene adenine phosphoribosyl transferase
Tssr79890 8 122574805 to 122574810 5 + TSS region transcription start site region 79890
Tssr83284 8 122575017 to 122575033 16 - TSS region transcription start site region 83284
Tssr83285 8 122575431 to 122575444 13 - TSS region transcription start site region 83285
Tssr83286 8 122575448 to 122575478 30 - TSS region transcription start site region 83286
Cpgi21225 8 122576232 to 122577243 1011 CpG island CpG island 21225
Tssr83287 8 122576613 to 122576624 11 - TSS region transcription start site region 83287
Tssr83288 8 122576830 to 122576892 62 - TSS region transcription start site region 83288
Tssr83289 8 122576899 to 122576927 28 - TSS region transcription start site region 83289
Galns 8 122578242 to 122611463 33221 - protein coding gene galactosamine (N-acetyl)-6-sulfate sulfatase