Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:115678570-118798700

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323 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D8Dcr41 8 115686886 to 115686986 100 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 41
6030439D06Rik 8 115687723 to 115692319 4596 unclassified gene RIKEN cDNA 6030439D06 gene
Tssr83013 8 115693798 to 115693804 6 - TSS region transcription start site region 83013
Tssr83014 8 115695271 to 115695308 37 - TSS region transcription start site region 83014
Tssr83015 8 115695964 to 115695967 3 - TSS region transcription start site region 83015
Tssr83016 8 115703037 to 115703059 22 - TSS region transcription start site region 83016
Tssr83017 8 115703107 to 115703133 26 - TSS region transcription start site region 83017
Tssr83018 8 115703139 to 115703159 20 - TSS region transcription start site region 83018
Maf 8 115703253 to 115706894 3641 - protein coding gene avian musculoaponeurotic fibrosarcoma oncogene homolog
Tssr83019 8 115703545 to 115703564 19 - TSS region transcription start site region 83019
Tssr83020 8 115703750 to 115703764 14 - TSS region transcription start site region 83020
Tssr83021 8 115703797 to 115703813 16 - TSS region transcription start site region 83021
Tssr83022 8 115703828 to 115703839 11 - TSS region transcription start site region 83022
Tssr83023 8 115703958 to 115703970 12 - TSS region transcription start site region 83023
Tssr83024 8 115704156 to 115704183 27 - TSS region transcription start site region 83024
Tssr83025 8 115704284 to 115704317 33 - TSS region transcription start site region 83025
Tssr83026 8 115704379 to 115704391 12 - TSS region transcription start site region 83026
Tssr83027 8 115704405 to 115704427 22 - TSS region transcription start site region 83027
Tssr83028 8 115704733 to 115704768 35 - TSS region transcription start site region 83028
Tssr83029 8 115704844 to 115704847 3 - TSS region transcription start site region 83029
Tssr83030 8 115704939 to 115704959 20 - TSS region transcription start site region 83030
Tssr83031 8 115705039 to 115705042 3 - TSS region transcription start site region 83031
Gm15655 8 115705078 to 115707233 2155 + antisense lncRNA gene predicted gene 15655
Tssr83032 8 115705099 to 115705113 14 - TSS region transcription start site region 83032
Tssr83033 8 115705182 to 115705193 11 - TSS region transcription start site region 83033
Tssr83034 8 115705217 to 115705235 18 - TSS region transcription start site region 83034
Tssr83035 8 115705265 to 115705276 11 - TSS region transcription start site region 83035
Tssr83036 8 115705295 to 115705306 11 - TSS region transcription start site region 83036
Tssr83037 8 115705317 to 115705344 27 - TSS region transcription start site region 83037
Tssr83038 8 115705348 to 115705361 13 - TSS region transcription start site region 83038
Tssr83039 8 115705384 to 115705399 15 - TSS region transcription start site region 83039
Tssr83040 8 115705461 to 115705514 53 - TSS region transcription start site region 83040
Cpgi21086 8 115705609 to 115708464 2855 CpG island CpG island 21086
Tssr83041 8 115705616 to 115705634 18 - TSS region transcription start site region 83041
Tssr83042 8 115705643 to 115705654 11 - TSS region transcription start site region 83042
Tssr83043 8 115705662 to 115705673 11 - TSS region transcription start site region 83043
Tssr83044 8 115705698 to 115705706 8 - TSS region transcription start site region 83044
Tssr2695 8 115705889 to 115705900 11 - TSS region transcription start site region 2695
Tssr83045 8 115705902 to 115705979 77 - TSS region transcription start site region 83045
Tssr83046 8 115705986 to 115705997 11 - TSS region transcription start site region 83046
Tssr83047 8 115706099 to 115706119 20 - TSS region transcription start site region 83047
Tssr83048 8 115706700 to 115706711 11 - TSS region transcription start site region 83048
Tssr83049 8 115706727 to 115706759 32 - TSS region transcription start site region 83049
Tssr83050 8 115706947 to 115706956 9 - TSS region transcription start site region 83050
Tssr83051 8 115706966 to 115706991 25 - TSS region transcription start site region 83051
Tssr83052 8 115706994 to 115707018 24 - TSS region transcription start site region 83052
Tssr83053 8 115707188 to 115707272 84 - TSS region transcription start site region 83053
Tssr83054 8 115707278 to 115707338 60 - TSS region transcription start site region 83054
Tssr79557 8 115707426 to 115707509 83 + TSS region transcription start site region 79557
Tssr83055 8 115707450 to 115707485 35 - TSS region transcription start site region 83055
Tssr83056 8 115707568 to 115707609 41 - TSS region transcription start site region 83056
Tssr83057 8 115707615 to 115707637 22 - TSS region transcription start site region 83057
Tssr79558 8 115707616 to 115707634 18 + TSS region transcription start site region 79558
Tssr83058 8 115707778 to 115707792 14 - TSS region transcription start site region 83058
Tssr83059 8 115707805 to 115707822 17 - TSS region transcription start site region 83059
Tssr83060 8 115707823 to 115707840 17 - TSS region transcription start site region 83060
Tssr79559 8 115707981 to 115707987 6 + TSS region transcription start site region 79559
Tssr79560 8 115708504 to 115708529 25 + TSS region transcription start site region 79560
Tssr83061 8 115713512 to 115713520 8 - TSS region transcription start site region 83061
Gm30712 8 115715872 to 115730008 14136 + lncRNA gene predicted gene, 30712
Tssr79561 8 115715919 to 115715924 5 + TSS region transcription start site region 79561
D8Mit321 8 115740378 to 115740484 106 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 321
4930509E22Rik 8 115770860 to 115771962 1102 unclassified gene RIKEN cDNA 4930509E22 gene
Gm30925 8 115830224 to 115841969 11745 + lncRNA gene predicted gene, 30925
Tssr79562 8 115830513 to 115830524 11 + TSS region transcription start site region 79562
Tssr79563 8 115830529 to 115830540 11 + TSS region transcription start site region 79563
Gm31037 8 115856253 to 115869493 13240 + lncRNA gene predicted gene, 31037
D8Mit215 8 115860738 to 115860915 177 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 215
Gm31106 8 115872900 to 115878136 5236 + lncRNA gene predicted gene, 31106
Gm31164 8 115904142 to 115906537 2395 - lncRNA gene predicted gene, 31164
Gm45733 8 115971635 to 115972071 436 - lincRNA gene predicted gene 45733
D8Mit272 8 116006485 to 116006595 110 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 272
Sluc9 8 116101792 to 116101929 137 QTL susceptibility to lung cancer 9
Im1 8 116101792 to 116101929 137 QTL Immunoregulatory 1
D8Mit35 8 116101792 to 116101929 137 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 35
Tssr79564 8 116126916 to 116126927 11 + TSS region transcription start site region 79564
4930422C21Rik 8 116181451 to 116187369 5918 - lincRNA gene RIKEN cDNA 4930422C21 gene
Gm31225 8 116190682 to 116192533 1851 + lncRNA gene predicted gene, 31225
Gm31278 8 116243515 to 116352435 108920 - lncRNA gene predicted gene, 31278
D8Mit89 8 116333216 to 116333346 130 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 89
1700018P08Rik 8 116357061 to 116359550 2489 + lincRNA gene RIKEN cDNA 1700018P08 gene
Tssr83062 8 116435720 to 116435732 12 - TSS region transcription start site region 83062
Tssr83063 8 116435763 to 116435774 11 - TSS region transcription start site region 83063
Cpgi21087 8 116480714 to 116480900 186 CpG island CpG island 21087
Gm5357 8 116489186 to 116491109 1923 + pseudogene predicted gene 5357
Gm9058 8 116501698 to 116502572 874 + pseudogene predicted gene 9058
Tssr79565 8 116501700 to 116501705 5 + TSS region transcription start site region 79565
Tssr79566 8 116504966 to 116504967 1 + TSS region transcription start site region 79566
Tssr79567 8 116504973 to 116505023 50 + TSS region transcription start site region 79567
Dynlrb2 8 116505015 to 116515915 10900 + protein coding gene dynein light chain roadblock-type 2
Gm39258 8 116527885 to 116529401 1516 - lncRNA gene predicted gene, 39258
D8Mit186 8 116528649 to 116528783 134 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 186
Tssr83064 8 116529385 to 116529392 7 - TSS region transcription start site region 83064
Tssr83065 8 116529414 to 116529422 8 - TSS region transcription start site region 83065
Tssr83066 8 116529442 to 116529449 7 - TSS region transcription start site region 83066
Tssr79568 8 116537980 to 116537983 3 + TSS region transcription start site region 79568
Tssr83067 8 116571888 to 116571892 4 - TSS region transcription start site region 83067
Tssr83068 8 116573962 to 116573965 3 - TSS region transcription start site region 83068
Cdyl2 8 116574400 to 116732991 158591 - protein coding gene chromodomain protein, Y chromosome-like 2
Gm31367 8 116605918 to 116610520 4602 + lncRNA gene predicted gene, 31367
Tssr79569 8 116605947 to 116605955 8 + TSS region transcription start site region 79569
Tssr83069 8 116616346 to 116616350 4 - TSS region transcription start site region 83069
Tssr83070 8 116673160 to 116673186 26 - TSS region transcription start site region 83070
Tssr83071 8 116677809 to 116677823 14 - TSS region transcription start site region 83071
Tssr83072 8 116677953 to 116677967 14 - TSS region transcription start site region 83072
Tssr83073 8 116708155 to 116708159 4 - TSS region transcription start site region 83073
Tssr83074 8 116711467 to 116711510 43 - TSS region transcription start site region 83074
Tssr83075 8 116713855 to 116713864 9 - TSS region transcription start site region 83075
D8Mit360 8 116721188 to 116721362 174 DNA segment DNA Segment, Chr 8, Massachusetts Institute of Technology 360
Cpgi21088 8 116732017 to 116733801 1784 CpG island CpG island 21088
Tssr83076 8 116732827 to 116732899 72 - TSS region transcription start site region 83076
Tssr83077 8 116733061 to 116733076 15 - TSS region transcription start site region 83077
Tssr83078 8 116733255 to 116733314 59 - TSS region transcription start site region 83078
Tssr83079 8 116733323 to 116733354 31 - TSS region transcription start site region 83079
Gm10620 8 116764144 to 116765479 1335 - pseudogene predicted gene 10620
D8Mit90 8 116778937 to 116779094 157 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 90
4930563M20Rik 8 116781712 to 116801412 19700 - lncRNA gene RIKEN cDNA 4930563M20 gene
Tssr83080 8 116799973 to 116799990 17 - TSS region transcription start site region 83080
Cpgi21089 8 116801295 to 116801770 475 CpG island CpG island 21089
D8Mit118 8 116813044 to 116813169 125 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 118
Gm42045 8 116841972 to 116853185 11213 - lncRNA gene predicted gene, 42045
Cpgi21090 8 116863347 to 116863764 417 CpG island CpG island 21090
Tssr79570 8 116873706 to 116873717 11 + TSS region transcription start site region 79570
Cmc2 8 116888685 to 116921455 32770 - protein coding gene COX assembly mitochondrial protein 2
Tssr83081 8 116894764 to 116894775 11 - TSS region transcription start site region 83081
Cpgi21091 8 116920985 to 116922162 1177 CpG island CpG island 21091
Tssr83082 8 116921378 to 116921392 14 - TSS region transcription start site region 83082
Tssr83083 8 116921408 to 116921451 43 - TSS region transcription start site region 83083
Tssr79571 8 116921715 to 116921733 18 + TSS region transcription start site region 79571
Cenpn 8 116921730 to 116941507 19777 + protein coding gene centromere protein N
Tssr79572 8 116921735 to 116921752 17 + TSS region transcription start site region 79572
Tssr79573 8 116921754 to 116921763 9 + TSS region transcription start site region 79573
Cpgi21092 8 116943147 to 116944368 1221 CpG island CpG island 21092
Tssr79574 8 116943387 to 116943424 37 + TSS region transcription start site region 79574
Atmin 8 116943393 to 116960445 17052 + protein coding gene ATM interactor
Tssr83084 8 116944100 to 116944129 29 - TSS region transcription start site region 83084
Tssr83085 8 116944182 to 116944195 13 - TSS region transcription start site region 83085
Tssr83086 8 116944324 to 116944330 6 - TSS region transcription start site region 83086
Tssr83087 8 116944373 to 116944384 11 - TSS region transcription start site region 83087
1700030J22Rik 8 116969599 to 116978954 9355 - protein coding gene RIKEN cDNA 1700030J22 gene
Cpgi21093 8 116978456 to 116979471 1015 CpG island CpG island 21093
Tssr83088 8 116978882 to 116978906 24 - TSS region transcription start site region 83088
Tssr83089 8 116978908 to 116978997 89 - TSS region transcription start site region 83089
Tssr79575 8 116979084 to 116979109 25 + TSS region transcription start site region 79575
Gcsh 8 116981828 to 116993449 11621 - protein coding gene glycine cleavage system protein H (aminomethyl carrier)
Cpgi21094 8 116992838 to 116993881 1043 CpG island CpG island 21094
Tssr83090 8 116993439 to 116993456 17 - TSS region transcription start site region 83090
Tssr83091 8 116993459 to 116993538 79 - TSS region transcription start site region 83091
Pkd1l2 8 116995679 to 117082449 86770 - protein coding gene polycystic kidney disease 1 like 2
Gm31519 8 117019043 to 117021941 2898 + lncRNA gene predicted gene, 31519
Cpgi21095 8 117028520 to 117028715 195 CpG island CpG island 21095
Gm15395 8 117036497 to 117043639 7142 + antisense lncRNA gene predicted gene 15395
Tssr79576 8 117051034 to 117051050 16 + TSS region transcription start site region 79576
Tssr79577 8 117055428 to 117055471 43 + TSS region transcription start site region 79577
Tssr83092 8 117068159 to 117068207 48 - TSS region transcription start site region 83092
Tssr2696 8 117074883 to 117074895 12 + TSS region transcription start site region 2696
Bco1 8 117095854 to 117133720 37866 + protein coding gene beta-carotene oxygenase 1
Tssr79578 8 117095859 to 117095875 16 + TSS region transcription start site region 79578
Tssr79579 8 117115840 to 117115844 4 + TSS region transcription start site region 79579
Gm20694 8 117125335 to 117125738 403 + pseudogene predicted gene 20694
Cpgi21096 8 117157294 to 117158870 1576 CpG island CpG island 21096
Tssr83093 8 117157785 to 117157803 18 - TSS region transcription start site region 83093
Tssr79580 8 117157950 to 117157967 17 + TSS region transcription start site region 79580
Tssr79581 8 117157972 to 117158035 63 + TSS region transcription start site region 79581
Gan 8 117158135 to 117205186 47051 + protein coding gene giant axonal neuropathy
Tssr83094 8 117158493 to 117158528 35 - TSS region transcription start site region 83094
Fbtq3 8 117238570 to 117238700 130 QTL femoral bone trait QTL 3
D8Mit167 8 117238570 to 117238700 130 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 167
Bmd39 8 117238700 to 32016544 -85222156 QTL bone mineral density 39
Cpgi21097 8 117256077 to 117257668 1591 CpG island CpG island 21097
Tssr79582 8 117256659 to 117256724 65 + TSS region transcription start site region 79582
Tssr79583 8 117256733 to 117256755 22 + TSS region transcription start site region 79583
Tssr79584 8 117256798 to 117256803 5 + TSS region transcription start site region 79584
Tssr79585 8 117256810 to 117256829 19 + TSS region transcription start site region 79585
Tssr79586 8 117256848 to 117256877 29 + TSS region transcription start site region 79586
Cmip 8 117257064 to 117459430 202366 + protein coding gene c-Maf inducing protein
Tssr79587 8 117257082 to 117257107 25 + TSS region transcription start site region 79587
Tssr79588 8 117257136 to 117257147 11 + TSS region transcription start site region 79588
Tssr83095 8 117258027 to 117258031 4 - TSS region transcription start site region 83095
A130010C12Rik 8 117258078 to 117260799 2721 unclassified gene RIKEN cDNA A130010C12 gene
Tssr79589 8 117258102 to 117258103 1 + TSS region transcription start site region 79589
Tssr79590 8 117265904 to 117265909 5 + TSS region transcription start site region 79590
Tssr79591 8 117266073 to 117266091 18 + TSS region transcription start site region 79591
Tssr79592 8 117274675 to 117274709 34 + TSS region transcription start site region 79592
Tssr79593 8 117275083 to 117275097 14 + TSS region transcription start site region 79593
Tssr79594 8 117275117 to 117275132 15 + TSS region transcription start site region 79594
Tssr79595 8 117275137 to 117275174 37 + TSS region transcription start site region 79595
Tssr79596 8 117275197 to 117275215 18 + TSS region transcription start site region 79596
4930572C08Rik 8 117290668 to 117292196 1528 unclassified gene RIKEN cDNA 4930572C08 gene
Tssr79597 8 117302466 to 117302481 15 + TSS region transcription start site region 79597
Tssr79598 8 117307732 to 117307736 4 + TSS region transcription start site region 79598
Tssr79599 8 117328874 to 117328878 4 + TSS region transcription start site region 79599
Tssr79600 8 117330396 to 117330481 85 + TSS region transcription start site region 79600
Tssr79601 8 117340196 to 117340199 3 + TSS region transcription start site region 79601
Tssr79602 8 117340472 to 117340494 22 + TSS region transcription start site region 79602
Tssr79603 8 117340535 to 117340550 15 + TSS region transcription start site region 79603
Tssr79604 8 117342670 to 117342673 3 + TSS region transcription start site region 79604
Tssr2697 8 117343258 to 117343307 49 + TSS region transcription start site region 2697
Tssr83096 8 117343677 to 117343691 14 - TSS region transcription start site region 83096
Slpapn3 8 117357915 to 117357915 0 QTL average percent sleep per night 3