Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:105358608-105519086

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc9a5 8 105348843 to 105369881 21038 + protein coding gene solute carrier family 9 (sodium/hydrogen exchanger), member 5
Tssr79140 8 105373265 to 105373277 12 + TSS region transcription start site region 79140
Plekhg4 8 105373274 to 105382862 9588 + protein coding gene pleckstrin homology domain containing, family G (with RhoGef domain) member 4
Cpgi20931 8 105374453 to 105375172 719 CpG island CpG island 20931
Kctd19 8 105382807 to 105413502 30695 - protein coding gene potassium channel tetramerisation domain containing 19
Tssr82650 8 105403811 to 105403813 2 - TSS region transcription start site region 82650
Cpgi20932 8 105413302 to 105413842 540 CpG island CpG island 20932
Tssr82651 8 105413459 to 105413465 6 - TSS region transcription start site region 82651
Tssr82652 8 105413473 to 105413526 53 - TSS region transcription start site region 82652
Lrrc36 8 105413608 to 105464086 50478 + protein coding gene leucine rich repeat containing 36
Tssr79141 8 105413614 to 105413631 17 + TSS region transcription start site region 79141
Tssr79142 8 105427587 to 105427619 32 + TSS region transcription start site region 79142
Tssr79143 8 105427622 to 105427633 11 + TSS region transcription start site region 79143
Tssr79144 8 105427634 to 105427646 12 + TSS region transcription start site region 79144
Tssr79145 8 105427648 to 105427672 24 + TSS region transcription start site region 79145
Tssr79146 8 105438802 to 105438807 5 + TSS region transcription start site region 79146
Tssr79147 8 105453562 to 105453566 4 + TSS region transcription start site region 79147
Tssr79148 8 105455276 to 105455287 11 + TSS region transcription start site region 79148
Tppp3 8 105467492 to 105471422 3930 - protein coding gene tubulin polymerization-promoting protein family member 3
Cpgi20933 8 105467888 to 105468631 743 CpG island CpG island 20933
Tssr82653 8 105467905 to 105467934 29 - TSS region transcription start site region 82653
Cpgi20934 8 105471153 to 105471620 467 CpG island CpG island 20934
Tssr82654 8 105471328 to 105471343 15 - TSS region transcription start site region 82654
Tssr82655 8 105471383 to 105471400 17 - TSS region transcription start site region 82655
Tssr82656 8 105471447 to 105471458 11 - TSS region transcription start site region 82656
Tssr82657 8 105471481 to 105471487 6 - TSS region transcription start site region 82657
Zdhhc1 8 105472423 to 105496902 24479 - protein coding gene zinc finger, DHHC domain containing 1
Cpgi20935 8 105472461 to 105472741 280 CpG island CpG island 20935
Tssr82658 8 105482848 to 105482861 13 - TSS region transcription start site region 82658
Tssr82659 8 105494659 to 105494675 16 - TSS region transcription start site region 82659
Cpgi20936 8 105496494 to 105497314 820 CpG island CpG island 20936
Tssr82660 8 105496975 to 105496982 7 - TSS region transcription start site region 82660
Tssr82661 8 105497023 to 105497068 45 - TSS region transcription start site region 82661
Tssr82662 8 105497089 to 105497094 5 - TSS region transcription start site region 82662
Tssr79149 8 105503198 to 105503202 4 + TSS region transcription start site region 79149
Gm8838 8 105503406 to 105503946 540 + pseudogene predicted gene 8838
Cpgi20937 8 105518339 to 105519327 988 CpG island CpG island 20937
Tssr79150 8 105518736 to 105518753 17 + TSS region transcription start site region 79150
Hsd11b2 8 105518755 to 105523988 5233 + protein coding gene hydroxysteroid 11-beta dehydrogenase 2
Tssr79151 8 105518884 to 105518917 33 + TSS region transcription start site region 79151
Tssr79152 8 105518929 to 105518947 18 + TSS region transcription start site region 79152