Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:104981851-105281856

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5743 8 104987130 to 104996811 9681 + pseudogene predicted gene 5743
Tssr79090 8 105000824 to 105000832 8 + TSS region transcription start site region 79090
Ces2h 8 105000853 to 105020410 19557 + protein coding gene carboxylesterase 2H
Gm45725 8 105045166 to 105045502 336 + pseudogene predicted gene 45725
Tssr79091 8 105048592 to 105048608 16 + TSS region transcription start site region 79091
Ces3a 8 105048601 to 105058413 9812 + protein coding gene carboxylesterase 3A
Gm45724 8 105051049 to 105051468 419 - unclassified gene predicted gene 45724
Tssr79092 8 105083619 to 105083622 3 + TSS region transcription start site region 79092
Tssr79093 8 105083753 to 105083757 4 + TSS region transcription start site region 79093
Ces3b 8 105083753 to 105093929 10176 + protein coding gene carboxylesterase 3B
Tssr79094 8 105104843 to 105104846 3 + TSS region transcription start site region 79094
Gm8804 8 105110624 to 105111421 797 + pseudogene predicted gene 8804
Ces4a 8 105131800 to 105150109 18309 + protein coding gene carboxylesterase 4A
Tssr79095 8 105131823 to 105131830 7 + TSS region transcription start site region 79095
Tssr79096 8 105131851 to 105131856 5 + TSS region transcription start site region 79096
Tssr79097 8 105131876 to 105131879 3 + TSS region transcription start site region 79097
Tssr79098 8 105131891 to 105131903 12 + TSS region transcription start site region 79098
Cpgi20910 8 105142373 to 105142893 520 CpG island CpG island 20910
Cpgi20911 8 105152873 to 105153332 459 CpG island CpG island 20911
Gm3830 8 105164587 to 105170367 5780 + lincRNA gene predicted gene 3830
Cpgi20912 8 105170208 to 105171861 1653 CpG island CpG island 20912
Tssr79099 8 105170668 to 105170686 18 + TSS region transcription start site region 79099
Cbfb 8 105170674 to 105217989 47315 + protein coding gene core binding factor beta
Tssr79100 8 105170696 to 105170719 23 + TSS region transcription start site region 79100
Tssr79101 8 105170728 to 105170759 31 + TSS region transcription start site region 79101
Tssr79102 8 105170761 to 105170813 52 + TSS region transcription start site region 79102
Tssr79103 8 105170842 to 105170923 81 + TSS region transcription start site region 79103
Tssr82626 8 105171441 to 105171454 13 - TSS region transcription start site region 82626
Tssr79104 8 105171550 to 105171569 19 + TSS region transcription start site region 79104
Gm22063 8 105172496 to 105172602 106 + snRNA gene predicted gene, 22063
Tssr79105 8 105174256 to 105174261 5 + TSS region transcription start site region 79105
Tssr79106 8 105175367 to 105175385 18 + TSS region transcription start site region 79106
Tssr79107 8 105178469 to 105178486 17 + TSS region transcription start site region 79107
Tssr79108 8 105178496 to 105178510 14 + TSS region transcription start site region 79108
AI225912 8 105198056 to 105201427 3371 + DNA segment expressed sequence AI225912
Gm24629 8 105203993 to 105204081 88 + unclassified non-coding RNA gene predicted gene, 24629
Tssr79109 8 105216736 to 105216753 17 + TSS region transcription start site region 79109
D8Ertd28e 8 105224049 to 105224258 209 DNA segment DNA segment, Chr 8, ERATO Doi 28, expressed
Cpgi20913 8 105224728 to 105225655 927 CpG island CpG island 20913
D230025D16Rik 8 105225146 to 105253053 27907 + protein coding gene RIKEN cDNA D230025D16 gene
Tssr79110 8 105225170 to 105225193 23 + TSS region transcription start site region 79110
Tssr79111 8 105225197 to 105225222 25 + TSS region transcription start site region 79111
Tssr79112 8 105225336 to 105225345 9 + TSS region transcription start site region 79112
Tssr79113 8 105226818 to 105226822 4 + TSS region transcription start site region 79113
B3gnt9 8 105252638 to 105255153 2515 - protein coding gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
Cpgi20914 8 105253601 to 105255233 1632 CpG island CpG island 20914
Tssr82627 8 105255100 to 105255157 57 - TSS region transcription start site region 82627
Tradd 8 105258575 to 105264594 6019 - protein coding gene TNFRSF1A-associated via death domain
Cpgi20915 8 105258758 to 105260128 1370 CpG island CpG island 20915
Cpgi20916 8 105264191 to 105264843 652 CpG island CpG island 20916
Tssr82628 8 105264578 to 105264585 7 - TSS region transcription start site region 82628
Tssr82629 8 105264586 to 105264618 32 - TSS region transcription start site region 82629
Fbxl8 8 105264648 to 105269326 4678 + protein coding gene F-box and leucine-rich repeat protein 8
Tssr79114 8 105264656 to 105264697 41 + TSS region transcription start site region 79114
Cpgi20917 8 105268085 to 105270274 2189 CpG island CpG island 20917
Tssr79115 8 105269788 to 105269836 48 + TSS region transcription start site region 79115
Hsf4 8 105269801 to 105275845 6044 + protein coding gene heat shock transcription factor 4
Tssr79116 8 105269837 to 105269857 20 + TSS region transcription start site region 79116
Cpgi20918 8 105270395 to 105271166 771 CpG island CpG island 20918
Tssr79117 8 105272071 to 105272088 17 + TSS region transcription start site region 79117
Nol3 8 105276140 to 105281939 5799 + protein coding gene nucleolar protein 3 (apoptosis repressor with CARD domain)
Cpgi20919 8 105276240 to 105276706 466 CpG island CpG island 20919
Tssr79118 8 105276383 to 105276426 43 + TSS region transcription start site region 79118
Tssr79119 8 105276432 to 105276436 4 + TSS region transcription start site region 79119
Tssr79120 8 105276438 to 105276482 44 + TSS region transcription start site region 79120
Cpgi20920 8 105278817 to 105279676 859 CpG island CpG island 20920
Tssr79121 8 105279325 to 105279345 20 + TSS region transcription start site region 79121
Tssr79122 8 105279363 to 105279374 11 + TSS region transcription start site region 79122
4931428F04Rik 8 105280409 to 105289528 9119 - protein coding gene RIKEN cDNA 4931428F04 gene
Tssr82630 8 105281425 to 105281440 15 - TSS region transcription start site region 82630
Tssr82631 8 105281490 to 105281508 18 - TSS region transcription start site region 82631