Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:104342639-104532657

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cmtm3 8 104339410 to 104347672 8262 + protein coding gene CKLF-like MARVEL transmembrane domain containing 3
Tssr79058 8 104345273 to 104345293 20 + TSS region transcription start site region 79058
Tssr79059 8 104346953 to 104346995 42 + TSS region transcription start site region 79059
Tssr79060 8 104347459 to 104347472 13 + TSS region transcription start site region 79060
Cmtm4 8 104348191 to 104395807 47616 - protein coding gene CKLF-like MARVEL transmembrane domain containing 4
Gm45877 8 104362602 to 104363668 1066 - sense intronic lncRNA gene predicted gene 45877
Cpgi20900 8 104394959 to 104396318 1359 CpG island CpG island 20900
Tssr82601 8 104395765 to 104395858 93 - TSS region transcription start site region 82601
Tssr82602 8 104395873 to 104395886 13 - TSS region transcription start site region 82602
Dync1li2 8 104417680 to 104443047 25367 - protein coding gene dynein, cytoplasmic 1 light intermediate chain 2
Tssr79061 8 104430724 to 104430727 3 + TSS region transcription start site region 79061
Cpgi20901 8 104436014 to 104436244 230 CpG island CpG island 20901
Tssr82603 8 104437639 to 104437657 18 - TSS region transcription start site region 82603
Gm45731 8 104438260 to 104439462 1202 + unclassified gene predicted gene 45731
Tssr82604 8 104441608 to 104441609 1 - TSS region transcription start site region 82604
Cpgi20902 8 104442044 to 104443145 1101 CpG island CpG island 20902
K230015D01Rik 8 104442271 to 104443786 1515 + antisense lncRNA gene RIKEN cDNA K230015D01 gene
Tssr82605 8 104442804 to 104442836 32 - TSS region transcription start site region 82605
Tssr82606 8 104442902 to 104442920 18 - TSS region transcription start site region 82606
Tssr2675 8 104442928 to 104442935 7 - TSS region transcription start site region 2675
Tssr82607 8 104442944 to 104442955 11 - TSS region transcription start site region 82607
Tssr82608 8 104442971 to 104442976 5 - TSS region transcription start site region 82608
Tssr82609 8 104443001 to 104443025 24 - TSS region transcription start site region 82609
Tssr82610 8 104443033 to 104443044 11 - TSS region transcription start site region 82610
Terb1 8 104446718 to 104509887 63169 - protein coding gene telomere repeat binding bouquet formation protein 1
Gm22148 8 104507902 to 104508008 106 + snRNA gene predicted gene, 22148
Cpgi20903 8 104509072 to 104510072 1000 CpG island CpG island 20903
Tssr82611 8 104509874 to 104509894 20 - TSS region transcription start site region 82611
Nae1 8 104511028 to 104534637 23609 - protein coding gene NEDD8 activating enzyme E1 subunit 1