Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:79396231-79516362

33 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Fanci	7	79392312 to 79450265	57953	+	protein coding gene	Fanconi anemia, complementation group I
Gm31653	7	79396496 to 79399128	2632	-	lncRNA gene	predicted gene, 31653
Tssr67346	7	79398665 to 79398681	16	+	TSS region	transcription start site region 67346
Tssr67347	7	79399133 to 79399145	12	+	TSS region	transcription start site region 67347
Gm16017	7	79412310 to 79412517	207	-	pseudogene	predicted gene 16017
D7Jpk3	7	79433189 to 79433329	140		DNA segment	DNA segment, Chr 7, Japan, Kominami 3
Polg	7	79448910 to 79466306	17396	-	protein coding gene	polymerase (DNA directed), gamma
Cpgi19294	7	79464612 to 79467201	2589		CpG island	CpG island 19294
Tssr73103	7	79465502 to 79465512	10	-	TSS region	transcription start site region 73103
Tssr73104	7	79466012 to 79466028	16	-	TSS region	transcription start site region 73104
Tssr73105	7	79466127 to 79466136	9	-	TSS region	transcription start site region 73105
Tssr73106	7	79466167 to 79466240	73	-	TSS region	transcription start site region 73106
Gm10616	7	79466409 to 79468535	2126	+	unclassified gene	predicted gene 10616
n-TRtcg5	7	79466419 to 79466491	72	+	tRNA gene	nuclear encoded tRNA arginine 5 (anticodon TCG)
Tssr73107	7	79477362 to 79477390	28	-	TSS region	transcription start site region 73107
Cpgi19295	7	79495991 to 79496418	427		CpG island	CpG island 19295
Cpgi19296	7	79499072 to 79500565	1493		CpG island	CpG island 19296
Tssr67348	7	79499134 to 79499151	17	+	TSS region	transcription start site region 67348
Tssr67349	7	79499976 to 79499987	11	+	TSS region	transcription start site region 67349
Tssr67350	7	79500018 to 79500035	17	+	TSS region	transcription start site region 67350
Mir9-3hg	7	79500026 to 79534403	34377	+	lincRNA gene	Mir9-3 host gene
Tssr67351	7	79500045 to 79500066	21	+	TSS region	transcription start site region 67351
Tssr67352	7	79500081 to 79500095	14	+	TSS region	transcription start site region 67352
Cpgi19297	7	79504439 to 79505707	1268		CpG island	CpG island 19297
Tssr73108	7	79504754 to 79504763	9	-	TSS region	transcription start site region 73108
Tssr67353	7	79504941 to 79504954	13	+	TSS region	transcription start site region 67353
Mir9-3	7	79505264 to 79505353	89	+	miRNA gene	microRNA 9-3
Tssr67354	7	79505336 to 79505347	11	+	TSS region	transcription start site region 67354
Cpgi19298	7	79505907 to 79506235	328		CpG island	CpG island 19298
Cpgi19299	7	79508130 to 79509461	1331		CpG island	CpG island 19299
A330074H02Rik	7	79510362 to 79511400	1038	+	unclassified gene	RIKEN cDNA A330074H02 gene
2900037B21Rik	7	79512924 to 79513260	336	+	unclassified gene	RIKEN cDNA 2900037B21 gene
Cpgi19300	7	79514619 to 79516000	1381		CpG island	CpG island 19300