Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:49875350-50963289

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr66842 7 49895602 to 49895612 10 + TSS region transcription start site region 66842
Cpgi19151 7 49908029 to 49908383 354 CpG island CpG island 19151
Cpgi19152 7 49908885 to 49909437 552 CpG island CpG island 19152
Tssr66843 7 49910070 to 49910071 1 + TSS region transcription start site region 66843
Tssr66844 7 49910083 to 49910103 20 + TSS region transcription start site region 66844
Tssr66845 7 49910112 to 49910127 15 + TSS region transcription start site region 66845
Slc6a5 7 49910146 to 49963856 53710 + protein coding gene solute carrier family 6 (neurotransmitter transporter, glycine), member 5
Tssr66846 7 49910206 to 49910223 17 + TSS region transcription start site region 66846
Tssr66847 7 49910232 to 49910242 10 + TSS region transcription start site region 66847
Tssr66848 7 49910259 to 49910281 22 + TSS region transcription start site region 66848
Tssr66849 7 49910307 to 49910314 7 + TSS region transcription start site region 66849
Tssr66850 7 49910315 to 49910337 22 + TSS region transcription start site region 66850
Tssr66851 7 49910352 to 49910358 6 + TSS region transcription start site region 66851
Cpgi19153 7 49911725 to 49912523 798 CpG island CpG island 19153
Tssr66852 7 49912055 to 49912073 18 + TSS region transcription start site region 66852
Tssr66853 7 49959795 to 49959799 4 + TSS region transcription start site region 66853
Tssr66854 7 49959935 to 49959944 9 + TSS region transcription start site region 66854
Cpgi19154 7 49974727 to 49976026 1299 CpG island CpG island 19154
Tssr66855 7 49975010 to 49975102 92 + TSS region transcription start site region 66855
Tssr66856 7 49975228 to 49975340 112 + TSS region transcription start site region 66856
Nell1 7 49975350 to 50863289 887939 + protein coding gene NEL-like 1
Tssr2272 7 50313838 to 50313840 2 + TSS region transcription start site region 2272
Nell1os 7 50517309 to 50575884 58575 - antisense lncRNA gene NEL-like 1, opposite strand
Tssr72644 7 50575934 to 50575943 9 - TSS region transcription start site region 72644
Tssr72645 7 50575948 to 50575956 8 - TSS region transcription start site region 72645
Tssr66857 7 50599151 to 50599154 3 + TSS region transcription start site region 66857
Tssr66858 7 50599172 to 50599179 7 + TSS region transcription start site region 66858
Tssr66859 7 50599180 to 50599201 21 + TSS region transcription start site region 66859
4933405O20Rik 7 50599190 to 50600528 1338 + protein coding gene RIKEN cDNA 4933405O20 gene
Tssr66860 7 50599204 to 50599218 14 + TSS region transcription start site region 66860
Gm9343 7 50940546 to 50943154 2608 - pseudogene predicted gene 9343
Gm21032 7 50949294 to 50951871 2577 - pseudogene predicted gene, 21032
Gm21033 7 50958042 to 50960649 2607 - pseudogene predicted gene, 21033