Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:3214711-3284755

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr70397 7 3216982 to 3217010 28 - TSS region transcription start site region 70397
Tssr64192 7 3217796 to 3217801 5 + TSS region transcription start site region 64192
Tssr64193 7 3217832 to 3217838 6 + TSS region transcription start site region 64193
Tssr64194 7 3218169 to 3218176 7 + TSS region transcription start site region 64194
Tssr64195 7 3218315 to 3218324 9 + TSS region transcription start site region 64195
Tssr64196 7 3218395 to 3218407 12 + TSS region transcription start site region 64196
Mir290a 7 3218626 to 3218708 82 + miRNA gene microRNA 290a
Mirc5 7 3218626 to 3220841 2215 complex/cluster/region microRNA cluster 5, including Mir290a through Mir295
Mir290b 7 3218638 to 3218695 57 - miRNA gene microRNA 290b
Tssr64197 7 3218697 to 3218731 34 + TSS region transcription start site region 64197
Cpgi18197 7 3218716 to 3219047 331 CpG island CpG island 18197
Mir291a 7 3218919 to 3219000 81 + miRNA gene microRNA 291a
Mir292 7 3219189 to 3219270 81 + miRNA gene microRNA 292
Mir292b 7 3219198 to 3219259 61 - miRNA gene microRNA 292b
Tssr64198 7 3219236 to 3219264 28 + TSS region transcription start site region 64198
Cpgi18198 7 3219374 to 3219537 163 CpG island CpG island 18198
Mir291b 7 3219482 to 3219560 78 + miRNA gene microRNA 291b
Nlrp12 7 3219495 to 3250159 30664 - protein coding gene NLR family, pyrin domain containing 12
Tssr64199 7 3219526 to 3219559 33 + TSS region transcription start site region 64199
Mirc41 7 3220343 to 3220841 498 complex/cluster/region micro RNA cluster 41, including Mir293 through Mir295
Mir293 7 3220343 to 3220422 79 + miRNA gene microRNA 293
Mir294 7 3220641 to 3220724 83 + miRNA gene microRNA 294
Mir295 7 3220773 to 3220841 68 + miRNA gene microRNA 295
D7Ertd143e 7 3220806 to 3221012 206 DNA segment DNA segment, Chr 7, ERATO Doi 143, expressed
Tssr64200 7 3220812 to 3220817 5 + TSS region transcription start site region 64200
Tssr70398 7 3228509 to 3228518 9 - TSS region transcription start site region 70398
Tssr70399 7 3228530 to 3228541 11 - TSS region transcription start site region 70399
Tssr70400 7 3249621 to 3249633 12 - TSS region transcription start site region 70400
Tssr70401 7 3249659 to 3249672 13 - TSS region transcription start site region 70401
Tssr70402 7 3249711 to 3249755 44 - TSS region transcription start site region 70402
Tssr64201 7 3249858 to 3249867 9 + TSS region transcription start site region 64201
Gm20553 7 3264349 to 3265192 843 - pseudogene predicted gene, 20553
Cpgi18199 7 3264627 to 3265106 479 CpG island CpG island 18199
Pbft4 7 3266568 to 3266693 125 QTL percent body fat 4
Mprf 7 3266568 to 3266693 125 QTL maternal performance
D7Mit21 7 3266568 to 3266693 125 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 21
Gm5340 7 3284599 to 3285474 875 - pseudogene predicted gene 5340
Abhr3 7 16903498 to 3266568 -13636930 QTL allergen-induced bronchial hyperresponsiveness 3