Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:30084171-30286030

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84 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26920 7 30056034 to 30090410 34376 - protein coding gene predicted gene, 26920
Zfp566 7 30077337 to 30090510 13173 - protein coding gene zinc finger protein 566
Gm44872 7 30085468 to 30085887 419 + pseudogene predicted gene 44872
Cpgi18776 7 30090097 to 30090711 614 CpG island CpG island 18776
Tssr71687 7 30090399 to 30090435 36 - TSS region transcription start site region 71687
Tssr71688 7 30090471 to 30090536 65 - TSS region transcription start site region 71688
Zfp260 7 30094782 to 30107622 12840 + protein coding gene zinc finger protein 260
Cpgi18777 7 30095108 to 30095325 217 CpG island CpG island 18777
Tssr65655 7 30095150 to 30095192 42 + TSS region transcription start site region 65655
A430042F24Rik 7 30096814 to 30097914 1100 unclassified gene RIKEN cDNA A430042F24 gene
Tssr65656 7 30099557 to 30099614 57 + TSS region transcription start site region 65656
Gm23368 7 30100840 to 30100935 95 - miRNA gene predicted gene, 23368
Tssr2181 7 30100841 to 30100843 2 + TSS region transcription start site region 2181
Cpgi18778 7 30121517 to 30122405 888 CpG island CpG island 18778
Tssr65657 7 30121915 to 30122001 86 + TSS region transcription start site region 65657
Zfp382 7 30121942 to 30134950 13008 + protein coding gene zinc finger protein 382
4930428B01Rik 7 30139913 to 30140746 833 unclassified gene RIKEN cDNA 4930428B01 gene
Cpgi18779 7 30143468 to 30144023 555 CpG island CpG island 18779
Gm10988 7 30151841 to 30152928 1087 + pseudogene predicted gene 10988
8430406M14Rik 7 30160488 to 30160784 296 unclassified gene RIKEN cDNA 8430406M14 gene
Zfp146 7 30161269 to 30169750 8481 - protein coding gene zinc finger protein 146
Cpgi18780 7 30169335 to 30170050 715 CpG island CpG island 18780
Tssr71689 7 30169681 to 30169696 15 - TSS region transcription start site region 71689
Tssr71690 7 30169701 to 30169766 65 - TSS region transcription start site region 71690
Tssr65658 7 30169861 to 30169912 51 + TSS region transcription start site region 65658
Gm5113 7 30169922 to 30180209 10287 + protein coding gene predicted gene 5113
Tssr65659 7 30184160 to 30184181 21 + TSS region transcription start site region 65659
Cox7a1 7 30184171 to 30186030 1859 + protein coding gene cytochrome c oxidase subunit 7A1
Tssr65660 7 30184186 to 30184211 25 + TSS region transcription start site region 65660
Tssr65661 7 30184212 to 30184216 4 + TSS region transcription start site region 65661
Capns1 7 30186942 to 30198794 11852 - protein coding gene calpain, small subunit 1
Tssr71691 7 30187268 to 30187284 16 - TSS region transcription start site region 71691
Tssr71692 7 30187392 to 30187409 17 - TSS region transcription start site region 71692
Tssr71693 7 30187478 to 30187516 38 - TSS region transcription start site region 71693
Tssr71694 7 30190119 to 30190140 21 - TSS region transcription start site region 71694
Tssr71695 7 30190690 to 30190738 48 - TSS region transcription start site region 71695
Cpgi18781 7 30192839 to 30193029 190 CpG island CpG island 18781
Tssr71696 7 30192906 to 30192930 24 - TSS region transcription start site region 71696
Tssr71697 7 30192944 to 30192951 7 - TSS region transcription start site region 71697
Tssr71698 7 30192968 to 30192982 14 - TSS region transcription start site region 71698
Tssr71699 7 30193098 to 30193108 10 - TSS region transcription start site region 71699
Tssr71700 7 30193120 to 30193143 23 - TSS region transcription start site region 71700
Tssr71701 7 30193338 to 30193367 29 - TSS region transcription start site region 71701
Cpgi18782 7 30193787 to 30194041 254 CpG island CpG island 18782
Tssr71702 7 30193794 to 30193819 25 - TSS region transcription start site region 71702
Tssr65662 7 30193929 to 30193957 28 + TSS region transcription start site region 65662
Gm26810 7 30193954 to 30200889 6935 + antisense lncRNA gene predicted gene, 26810
Tssr71703 7 30194000 to 30194033 33 - TSS region transcription start site region 71703
Tssr71704 7 30194094 to 30194140 46 - TSS region transcription start site region 71704
Tssr71705 7 30194152 to 30194162 10 - TSS region transcription start site region 71705
Cpgi18783 7 30194479 to 30195316 837 CpG island CpG island 18783
Tssr71706 7 30195020 to 30195031 11 - TSS region transcription start site region 71706
Tssr71707 7 30195032 to 30195043 11 - TSS region transcription start site region 71707
Tssr71708 7 30195046 to 30195090 44 - TSS region transcription start site region 71708
Tssr71709 7 30195221 to 30195225 4 - TSS region transcription start site region 71709
Tssr71710 7 30195563 to 30195569 6 - TSS region transcription start site region 71710
Tssr71711 7 30198819 to 30198843 24 - TSS region transcription start site region 71711
Tssr71712 7 30198851 to 30198879 28 - TSS region transcription start site region 71712
Gm44600 7 30212628 to 30212738 110 - pseudogene predicted gene 44600
Cpgi18784 7 30216848 to 30217107 259 CpG island CpG island 18784
Tssr71713 7 30216926 to 30216933 7 - TSS region transcription start site region 71713
Tbcb 7 30224130 to 30232029 7899 - protein coding gene tubulin folding cofactor B
Cpgi18785 7 30231421 to 30233095 1674 CpG island CpG island 18785
Tssr71714 7 30231705 to 30231716 11 - TSS region transcription start site region 71714
Tssr71715 7 30231722 to 30231790 68 - TSS region transcription start site region 71715
Tssr65663 7 30231884 to 30231901 17 + TSS region transcription start site region 65663
Tssr65664 7 30232033 to 30232050 17 + TSS region transcription start site region 65664
Polr2i 7 30232074 to 30233387 1313 + protein coding gene polymerase (RNA) II (DNA directed) polypeptide I
Tssr71716 7 30232186 to 30232205 19 - TSS region transcription start site region 71716
Tssr65665 7 30232310 to 30232350 40 + TSS region transcription start site region 65665
Ovol3 7 30233439 to 30235725 2286 - protein coding gene ovo like zinc finger 3
Wdr62 7 30240138 to 30280419 40281 - protein coding gene WD repeat domain 62
Tssr71717 7 30242863 to 30242871 8 - TSS region transcription start site region 71717
Tssr71718 7 30242875 to 30242882 7 - TSS region transcription start site region 71718
Tssr71719 7 30243499 to 30243535 36 - TSS region transcription start site region 71719
Tssr65666 7 30263174 to 30263179 5 + TSS region transcription start site region 65666
Rps12-ps5 7 30263263 to 30263651 388 + pseudogene ribosomal protein S12, pseudogene 5
Tssr71720 7 30263955 to 30263958 3 - TSS region transcription start site region 71720
Cpgi18786 7 30279736 to 30281020 1284 CpG island CpG island 18786
Tssr65667 7 30280087 to 30280142 55 + TSS region transcription start site region 65667
Thap8 7 30280094 to 30290237 10143 + protein coding gene THAP domain containing 8
Tssr65668 7 30280186 to 30280188 2 + TSS region transcription start site region 65668
Tssr71721 7 30280335 to 30280424 89 - TSS region transcription start site region 71721
Tssr65669 7 30280534 to 30280584 50 + TSS region transcription start site region 65669