Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:127230830-127553662

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162 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dp(7Slx1b-Sept1)5Aam 7 126689468 to 127232987 543519 chromosomal duplication duplication, Chr 7, Alea A Mills 5
Del(7Slx1b-Sept1)4Aam 7 126689468 to 127232987 543519 chromosomal deletion deletion, Chr 7, Alea A Mills 4
Sept1 7 127214442 to 127232987 18545 - protein coding gene septin 1
Gm4532 7 127232418 to 127233130 712 - lncRNA gene predicted gene 4532
Tssr74974 7 127232631 to 127232654 23 - TSS region transcription start site region 74974
Cpgi19733 7 127232735 to 127233713 978 CpG island CpG island 19733
Tssr74975 7 127232748 to 127232752 4 - TSS region transcription start site region 74975
Tssr69182 7 127232884 to 127232904 20 + TSS region transcription start site region 69182
Tssr74976 7 127232890 to 127232968 78 - TSS region transcription start site region 74976
Tssr69183 7 127233044 to 127233073 29 + TSS region transcription start site region 69183
Tssr74977 7 127233124 to 127233235 111 - TSS region transcription start site region 74977
Tssr69184 7 127233227 to 127233317 90 + TSS region transcription start site region 69184
Zfp553 7 127233255 to 127238042 4787 + protein coding gene zinc finger protein 553
Cpgi19734 7 127243988 to 127245162 1174 CpG island CpG island 19734
Zfp771 7 127244480 to 127254807 10327 + protein coding gene zinc finger protein 771
Tssr69185 7 127244511 to 127244578 67 + TSS region transcription start site region 69185
Cpgi19735 7 127253466 to 127254998 1532 CpG island CpG island 19735
Dctpp1 7 127256959 to 127260667 3708 - protein coding gene dCTP pyrophosphatase 1
Cpgi19736 7 127260400 to 127260939 539 CpG island CpG island 19736
Tssr74978 7 127260606 to 127260609 3 - TSS region transcription start site region 74978
Tssr74979 7 127260620 to 127260676 56 - TSS region transcription start site region 74979
Tssr74980 7 127260677 to 127260706 29 - TSS region transcription start site region 74980
Sephs2 7 127271879 to 127274055 2176 - protein coding gene selenophosphate synthetase 2
Tssr74981 7 127272483 to 127272489 6 - TSS region transcription start site region 74981
Tssr74982 7 127273130 to 127273160 30 - TSS region transcription start site region 74982
Cpgi19737 7 127273181 to 127274389 1208 CpG island CpG island 19737
Gm44729 7 127273264 to 127275315 2051 + unclassified gene predicted gene 44729
Tssr74983 7 127273512 to 127273525 13 - TSS region transcription start site region 74983
Tssr2405 7 127273991 to 127274000 9 - TSS region transcription start site region 2405
Tssr74984 7 127274008 to 127274036 28 - TSS region transcription start site region 74984
Tssr74985 7 127274047 to 127274066 19 - TSS region transcription start site region 74985
Tssr74986 7 127274081 to 127274089 8 - TSS region transcription start site region 74986
Tssr69186 7 127278561 to 127278575 14 + TSS region transcription start site region 69186
Gm17511 7 127286044 to 127286385 341 - pseudogene predicted gene, 17511
Tssr74987 7 127286496 to 127286497 1 - TSS region transcription start site region 74987
Gm31897 7 127287729 to 127290619 2890 + lincRNA gene predicted gene, 31897
Tssr69187 7 127288201 to 127288225 24 + TSS region transcription start site region 69187
Tssr69188 7 127296229 to 127296232 3 + TSS region transcription start site region 69188
Tssr69189 7 127296236 to 127296247 11 + TSS region transcription start site region 69189
Tssr69190 7 127296251 to 127296275 24 + TSS region transcription start site region 69190
Itgal 7 127296260 to 127335138 38878 + protein coding gene integrin alpha L
Tssr69191 7 127296291 to 127296320 29 + TSS region transcription start site region 69191
Tssr69192 7 127296338 to 127296352 14 + TSS region transcription start site region 69192
Tssr69193 7 127296369 to 127296389 20 + TSS region transcription start site region 69193
Tssr69194 7 127297328 to 127297377 49 + TSS region transcription start site region 69194
Tssr69195 7 127297387 to 127297399 12 + TSS region transcription start site region 69195
Tssr69196 7 127297414 to 127297434 20 + TSS region transcription start site region 69196
Tssr69197 7 127297608 to 127297619 11 + TSS region transcription start site region 69197
Tssr69198 7 127325220 to 127325243 23 + TSS region transcription start site region 69198
Tssr69199 7 127326311 to 127326345 34 + TSS region transcription start site region 69199
Tssr69200 7 127332354 to 127332362 8 + TSS region transcription start site region 69200
Tssr69201 7 127333570 to 127333581 11 + TSS region transcription start site region 69201
Tssr69202 7 127333602 to 127333625 23 + TSS region transcription start site region 69202
Tssr69203 7 127333650 to 127333667 17 + TSS region transcription start site region 69203
Tssr69204 7 127333781 to 127333835 54 + TSS region transcription start site region 69204
Tssr69205 7 127334713 to 127334748 35 + TSS region transcription start site region 69205
Tssr74988 7 127335121 to 127335139 18 - TSS region transcription start site region 74988
Zfp768 7 127342795 to 127345314 2519 - protein coding gene zinc finger protein 768
Cpgi19738 7 127343303 to 127343964 661 CpG island CpG island 19738
Tssr69206 7 127344397 to 127344430 33 + TSS region transcription start site region 69206
Cpgi19739 7 127344927 to 127346393 1466 CpG island CpG island 19739
Tssr74989 7 127345343 to 127345400 57 - TSS region transcription start site region 74989
Tssr74990 7 127345405 to 127345416 11 - TSS region transcription start site region 74990
Tssr74991 7 127345582 to 127345609 27 - TSS region transcription start site region 74991
Cpgi19740 7 127361444 to 127361700 256 CpG island CpG island 19740
Cpgi19741 7 127363594 to 127364029 435 CpG island CpG island 19741
Zfp747 7 127372537 to 127376050 3513 - protein coding gene zinc finger protein 747
Cpgi19742 7 127375628 to 127376099 471 CpG island CpG island 19742
Tssr74992 7 127375959 to 127375988 29 - TSS region transcription start site region 74992
Tssr74993 7 127375997 to 127376020 23 - TSS region transcription start site region 74993
Tssr74994 7 127376028 to 127376055 27 - TSS region transcription start site region 74994
9130019O22Rik 7 127382260 to 127387166 4906 - protein coding gene RIKEN cDNA 9130019O22 gene
Cpgi19743 7 127386668 to 127387030 362 CpG island CpG island 19743
Tssr74995 7 127387132 to 127387151 19 - TSS region transcription start site region 74995
Tssr74996 7 127387159 to 127387184 25 - TSS region transcription start site region 74996
E430018J23Rik 7 127390830 to 127393662 2832 - protein coding gene RIKEN cDNA E430018J23 gene
Cpgi19744 7 127391687 to 127392086 399 CpG island CpG island 19744
Cpgi19745 7 127393078 to 127393555 477 CpG island CpG island 19745
Tssr74997 7 127393604 to 127393663 59 - TSS region transcription start site region 74997
Smt3h2-ps2 7 127397978 to 127398265 287 + pseudogene SMT3 suppressor of mif two 3 homolog 2, pseudogene 2 (S. cerevisiae)
Zfp764 7 127403668 to 127406822 3154 - protein coding gene zinc finger protein 764
Cpgi19746 7 127406270 to 127406852 582 CpG island CpG island 19746
Tssr74998 7 127406775 to 127406799 24 - TSS region transcription start site region 74998
Tssr74999 7 127406807 to 127406831 24 - TSS region transcription start site region 74999
Gm33080 7 127410820 to 127410991 171 - pseudogene predicted gene, 33080
Zfp688 7 127418967 to 127422068 3101 - protein coding gene zinc finger protein 688
Cpgi19747 7 127421620 to 127422361 741 CpG island CpG island 19747
Tssr75000 7 127421787 to 127421797 10 - TSS region transcription start site region 75000
Tssr75001 7 127422002 to 127422059 57 - TSS region transcription start site region 75001
Gm45184 7 127434422 to 127439392 4970 + lincRNA gene predicted gene 45184
Zfp689 7 127442136 to 127449158 7022 - protein coding gene zinc finger protein 689
Cpgi19748 7 127444109 to 127444876 767 CpG island CpG island 19748
Cpgi19749 7 127448531 to 127449301 770 CpG island CpG island 19749
Tssr75002 7 127448613 to 127448660 47 - TSS region transcription start site region 75002
Tssr69207 7 127448626 to 127448644 18 + TSS region transcription start site region 69207
B130055M24Rik 7 127448636 to 127460360 11724 + lncRNA gene RIKEN cDNA B130055M24 gene
Tssr69208 7 127448656 to 127448707 51 + TSS region transcription start site region 69208
Tssr75003 7 127449060 to 127449077 17 - TSS region transcription start site region 75003
Tssr75004 7 127449109 to 127449166 57 - TSS region transcription start site region 75004
Gm45110 7 127455469 to 127456870 1401 + unclassified gene predicted gene 45110
Prr14 7 127465025 to 127476767 11742 + protein coding gene proline rich 14
Tssr69209 7 127470354 to 127470370 16 + TSS region transcription start site region 69209
Tssr75005 7 127470862 to 127470899 37 - TSS region transcription start site region 75005
Tssr69210 7 127470991 to 127471006 15 + TSS region transcription start site region 69210
Tssr69211 7 127471009 to 127471036 27 + TSS region transcription start site region 69211
Tssr69212 7 127471043 to 127471054 11 + TSS region transcription start site region 69212
Tssr69213 7 127471088 to 127471098 10 + TSS region transcription start site region 69213
Tssr69214 7 127471355 to 127471368 13 + TSS region transcription start site region 69214
Tssr69215 7 127471459 to 127471483 24 + TSS region transcription start site region 69215
Tssr69216 7 127471484 to 127471551 67 + TSS region transcription start site region 69216
Cpgi19750 7 127471554 to 127472221 667 CpG island CpG island 19750
Tssr69217 7 127471599 to 127471628 29 + TSS region transcription start site region 69217
Tssr69218 7 127471709 to 127471724 15 + TSS region transcription start site region 69218
Tssr69219 7 127475115 to 127475128 13 + TSS region transcription start site region 69219
Tssr69220 7 127475201 to 127475217 16 + TSS region transcription start site region 69220
Cpgi19751 7 127477567 to 127479941 2374 CpG island CpG island 19751
Tssr2406 7 127478158 to 127478195 37 + TSS region transcription start site region 2406
Tssr69221 7 127478207 to 127478256 49 + TSS region transcription start site region 69221
Tssr69222 7 127478494 to 127478549 55 + TSS region transcription start site region 69222
Tssr69223 7 127478553 to 127478563 10 + TSS region transcription start site region 69223
Tssr69224 7 127478796 to 127478839 43 + TSS region transcription start site region 69224
Tssr69225 7 127478843 to 127478874 31 + TSS region transcription start site region 69225
Tssr69226 7 127478943 to 127478967 24 + TSS region transcription start site region 69226
Tssr69227 7 127478983 to 127478999 16 + TSS region transcription start site region 69227
Tssr69228 7 127479014 to 127479036 22 + TSS region transcription start site region 69228
Tssr69229 7 127479048 to 127479091 43 + TSS region transcription start site region 69229
Tssr69230 7 127479094 to 127479110 16 + TSS region transcription start site region 69230
Tssr69231 7 127479191 to 127479272 81 + TSS region transcription start site region 69231
Fbrs 7 127479199 to 127491711 12512 + protein coding gene fibrosin
Tssr69232 7 127479852 to 127479865 13 + TSS region transcription start site region 69232
Tssr69233 7 127480068 to 127480081 13 + TSS region transcription start site region 69233
Tssr69234 7 127480616 to 127480626 10 + TSS region transcription start site region 69234
Tssr69235 7 127481337 to 127481358 21 + TSS region transcription start site region 69235
Tssr69236 7 127483017 to 127483107 90 + TSS region transcription start site region 69236
Tssr69237 7 127483108 to 127483138 30 + TSS region transcription start site region 69237
Tssr69238 7 127485109 to 127485161 52 + TSS region transcription start site region 69238
Mir7060 7 127489251 to 127489387 136 + miRNA gene microRNA 7060
Tssr69239 7 127490059 to 127490072 13 + TSS region transcription start site region 69239
Tssr69240 7 127490293 to 127490310 17 + TSS region transcription start site region 69240
Tssr69241 7 127490344 to 127490358 14 + TSS region transcription start site region 69241
Tssr69242 7 127490418 to 127490428 10 + TSS region transcription start site region 69242
Gm47278 7 127490842 to 127490932 90 + miRNA gene predicted gene, 47278
1700008J07Rik 7 127510438 to 127512869 2431 - antisense lncRNA gene RIKEN cDNA 1700008J07 gene
Cpgi19752 7 127511609 to 127513045 1436 CpG island CpG island 19752
Tssr69243 7 127511976 to 127512075 99 + TSS region transcription start site region 69243
Srcap 7 127511983 to 127561219 49236 + protein coding gene Snf2-related CREBBP activator protein
Tssr69244 7 127512081 to 127512090 9 + TSS region transcription start site region 69244
Tssr69245 7 127512091 to 127512102 11 + TSS region transcription start site region 69245
Tssr75006 7 127512231 to 127512242 11 - TSS region transcription start site region 75006
Tssr75007 7 127512308 to 127512326 18 - TSS region transcription start site region 75007
Tssr75008 7 127512333 to 127512387 54 - TSS region transcription start site region 75008
Tssr69246 7 127512403 to 127512496 93 + TSS region transcription start site region 69246
Tssr75009 7 127512406 to 127512417 11 - TSS region transcription start site region 75009
Tssr75010 7 127512836 to 127512869 33 - TSS region transcription start site region 75010
Gm42715 7 127519584 to 127567054 47470 + protein coding gene predicted gene 42715
Tssr69247 7 127519652 to 127519670 18 + TSS region transcription start site region 69247
Tssr69248 7 127520085 to 127520090 5 + TSS region transcription start site region 69248
Tssr69249 7 127525134 to 127525138 4 + TSS region transcription start site region 69249
Snora30 7 127527897 to 127528003 106 + snoRNA gene small nucleolar RNA, H/ACA box 30
Tssr69250 7 127530217 to 127530237 20 + TSS region transcription start site region 69250
Tssr69251 7 127541303 to 127541325 22 + TSS region transcription start site region 69251
Tssr69252 7 127543195 to 127543225 30 + TSS region transcription start site region 69252