Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:115931363-116255210

41 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sox6	7	115470872 to 116038796	567924	-	protein coding gene	SRY (sex determining region Y)-box 6
Tssr74375	7	115953298 to 115953328	30	-	TSS region	transcription start site region 74375
Tssr74376	7	115953345 to 115953355	10	-	TSS region	transcription start site region 74376
Tssr68685	7	115995266 to 115995286	20	+	TSS region	transcription start site region 68685
Gm45025	7	115995274 to 116014145	18871	+	antisense lncRNA gene	predicted gene 45025
Tssr74377	7	116030971 to 116031000	29	-	TSS region	transcription start site region 74377
Tssr74378	7	116031092 to 116031122	30	-	TSS region	transcription start site region 74378
Cpgi19603	7	116031298 to 116032524	1226		CpG island	CpG island 19603
Tssr68686	7	116031920 to 116031932	12	+	TSS region	transcription start site region 68686
Sox6os	7	116031979 to 116032550	571	+	antisense lncRNA gene	SRY (sex determining region Y)-box 6, opposite strand
Tssr68687	7	116031996 to 116032009	13	+	TSS region	transcription start site region 68687
Cpgi19604	7	116033464 to 116034792	1328		CpG island	CpG island 19604
Tssr74379	7	116033606 to 116033624	18	-	TSS region	transcription start site region 74379
Tssr74380	7	116033811 to 116033822	11	-	TSS region	transcription start site region 74380
Tssr74381	7	116033863 to 116033895	32	-	TSS region	transcription start site region 74381
Tssr74382	7	116034309 to 116034338	29	-	TSS region	transcription start site region 74382
Tssr74383	7	116034390 to 116034417	27	-	TSS region	transcription start site region 74383
Tssr74384	7	116034463 to 116034543	80	-	TSS region	transcription start site region 74384
Tssr74385	7	116034597 to 116034619	22	-	TSS region	transcription start site region 74385
Tssr74386	7	116038734 to 116038750	16	-	TSS region	transcription start site region 74386
Tssr74387	7	116038804 to 116038818	14	-	TSS region	transcription start site region 74387
Cpgi19605	7	116039427 to 116040499	1072		CpG island	CpG island 19605
Tssr74388	7	116039564 to 116039577	13	-	TSS region	transcription start site region 74388
1700003G18Rik	7	116081762 to 116093149	11387	-	lncRNA gene	RIKEN cDNA 1700003G18 gene
Gm4353	7	116082863 to 116084633	1770	-	pseudogene	predicted gene 4353
Cpgi19606	7	116093006 to 116093734	728		CpG island	CpG island 19606
Tssr74389	7	116093119 to 116093165	46	-	TSS region	transcription start site region 74389
Tssr68688	7	116093296 to 116093329	33	+	TSS region	transcription start site region 68688
Tssr74390	7	116093311 to 116093320	9	-	TSS region	transcription start site region 74390
Tssr68689	7	116093339 to 116093372	33	+	TSS region	transcription start site region 68689
1110004F10Rik	7	116093380 to 116105210	11830	+	protein coding gene	RIKEN cDNA 1110004F10 gene
Plekha7	7	116123485 to 116308376	184891	-	protein coding gene	pleckstrin homology domain containing, family A member 7
Tssr74391	7	116198487 to 116198517	30	-	TSS region	transcription start site region 74391
Tssr74392	7	116202356 to 116202360	4	-	TSS region	transcription start site region 74392
Cpgi19607	7	116236976 to 116238048	1072		CpG island	CpG island 19607
Tssr74393	7	116237615 to 116237630	15	-	TSS region	transcription start site region 74393
Tssr74394	7	116237643 to 116237661	18	-	TSS region	transcription start site region 74394
Tssr74395	7	116237767 to 116237781	14	-	TSS region	transcription start site region 74395
Tssr74396	7	116237800 to 116237821	21	-	TSS region	transcription start site region 74396
Tssr74397	7	116238384 to 116238392	8	-	TSS region	transcription start site region 74397
Tssr74398	7	116238412 to 116238427	15	-	TSS region	transcription start site region 74398